RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1069776" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1069776 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28204152 28204152 PRJNA1069776_S_NODE_37186_length_179_cov_2.117647_g36872_i0 PRJNA1069776 37186 179 2.117647 3.79058813 Erythrocytic necrosis virus 1543320 Viruses Viruses 91.7 9.46e-23   NR QCF47522.1 1543320 g36872 i0 88.2 0.854748603351955 51 6 85.5 0 3 155 6 56 QCF47522.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 153 91.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29025613 29025613 PRJNA1069776_S_NODE_54168_length_151_cov_2.222222_g53854_i0 PRJNA1069776 54168 151 2.222222 3.35555522 Adintovirus anguilla10665 3115889 Viruses Viruses 53.1 1.81e-6   NR DBA49780.1 3115889 g53854 i0 64.7 1.35099337748344 34 12 67.5 0 151 50 217 250 DBA49780.1 MAG TPA_asm: Penton [Adintovirus anguilla10665] diamond 204 53.1 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus anguilla10665
29151951 29151951 PRJNA1069776_S_NODE_37209_length_179_cov_2.036765_g36895_i0 PRJNA1069776 37209 179 2.036765 3.64580935 Larimichthys croaker adintovirus 2609857 Viruses Viruses 68.2 5.78e-13   NR DBA47696.1 2609857 g36895 i0 64.6 0.804469273743017 48 17 80.4 0 166 23 64 111 DBA47696.1 MAG TPA_asm: GasderminX [Adintovirus homo13306] diamond 144 68.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Larimichthys croaker adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;