RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1069776" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1069776 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5287271 5287271 PRJNA1069776_S_NODE_11085_length_296_cov_14.430830_g10771_i0 PRJNA1069776 11085 296 14.43083 42.7152568 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 196 1.0499999999999998e-56   NR MBF0981305.1 2044595 g10771 i0 99 0.993243243243243 98 1 99.3 0 294 1 158 255 MBF0981305.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 294 196 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29561902 29561902 PRJNA1069776_S_NODE_25510_length_211_cov_4.857143_g25196_i0 PRJNA1069776 25510 211 4.857143 10.24857173 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 42 0.0444   NR MBF0499013.1 2053586 g25196 i0 38.8 0.696682464454976 49 29 69.7 1 155 9 72 119 MBF0499013.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 147 42 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;