RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1068830" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1068830 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12493265 12493265 PRJNA1068830_P_NODE_87230_length_243_cov_0.917647_g86527_i0 PRJNA1068830 87230 243 0.917647 2.22988221 Dispira parvispora 1520584 Fungi Fungi 116 4.14e-28   NR KAJ1959130.1 1520584 g86527 i0 66.2 1.88888888888889 77 24 92.6 1 3 227 504 580 KAJ1959130.1 valine--tRNA ligase, partial [Dispira parvispora] diamond 459 116 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora
28109453 28109453 PRJNA1068830_P_NODE_37325_length_366_cov_2.918089_g36622_i0 PRJNA1068830 37325 366 2.918089 10.68020574 Coemansia brasiliensis 2650707 Fungi Fungi 83.6 9.13e-18   NR KAJ2848419.1 2650707 g36622 i0 38.5 0.786885245901639 96 59 78.7 0 36 323 2 97 KAJ2848419.1 hypothetical protein IWW36_003311 [Coemansia brasiliensis] diamond 288 83.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia brasiliensis
32461820 32461820 PRJNA1068830_P_NODE_37819_length_364_cov_1.072165_g37116_i0 PRJNA1068830 37819 364 1.072165 3.9026806 root 1 Root_unresolved Root_unresolved 46.6 0.00194   NR KAI9295176.1 1314799 g37116 i0 37.9 4.03846153846154 66 40 54.4 1 316 119 19 83 KAI9295176.1 profilin-like protein [Neoconidiobolus thromboides FSU 785] diamond 1470 46.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;