contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA1068830" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15486463 | 15486463 | PRJNA1068830_P_NODE_82653_length_246_cov_0.901734_g81950_i0 | PRJNA1068830 | 82653 | 246 | 0.901734 | 2.21826564 | Akkermansia glycaniphila | 1679444 | Bacteria | Bacteria | 82 | 5.33e-18 | NR | OCA02583.1 | 1679444 | g81950 | i0 | 95.3 | 1.04878048780488 | 43 | 2 | 52.4 | 0 | 246 | 118 | 71 | 113 | OCA02583.1 transposase [Akkermansia glycaniphila] | diamond | 258 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia glycaniphila | |
| 27098914 | 27098914 | PRJNA1068830_P_NODE_78602_length_249_cov_0.886364_g77899_i0 | PRJNA1068830 | 78602 | 249 | 0.886364 | 2.20704636 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57.4 | 2.62e-7 | NR | MBV9009557.1 | 2026799 | g77899 | i0 | 53.7 | 2.12048192771084 | 54 | 24 | 65.1 | 1 | 2 | 163 | 82 | 134 | MBV9009557.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 528 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27541384 | 27541384 | PRJNA1068830_P_NODE_70124_length_257_cov_1.695652_g69421_i0 | PRJNA1068830 | 70124 | 257 | 1.695652 | 4.35782564 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 42.7 | 0.045 | NR | HEY1764242.1 | 2006848 | g69421 | i0 | 33.8 | 0.793774319066148 | 68 | 37 | 70 | 2 | 47 | 226 | 499 | 566 | HEY1764242.1 right-handed parallel beta-helix repeat-containing protein [Opitutaceae bacterium] | diamond | 204 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 28101057 | 28101057 | PRJNA1068830_P_NODE_83745_length_245_cov_0.906977_g83042_i0 | PRJNA1068830 | 83745 | 245 | 0.906977 | 2.22209365 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 3.19e-6 | NR | MCX6961305.1 | 2026799 | g83042 | i0 | 42.7 | 6.24489795918367 | 75 | 39 | 86.9 | 2 | 7 | 219 | 104 | 178 | MCX6961305.1 YbjN domain-containing protein [Verrucomicrobiota bacterium] | diamond | 1530 | 53.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28606322 | 28606322 | PRJNA1068830_P_NODE_86647_length_243_cov_0.917647_g85944_i0 | PRJNA1068830 | 86647 | 243 | 0.917647 | 2.22988221 | Bacteria | 2 | Bacteria | Bacteria | 140 | 5.54e-38 | NR | MBI4658269.1 | 2026799 | g85944 | i0 | 77.8 | 9 | 81 | 18 | 100 | 0 | 1 | 243 | 288 | 368 | MBI4658269.1 terpene cyclase/mutase family protein [Verrucomicrobiota bacterium] | diamond | 2187 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28804005 | 28804005 | PRJNA1068830_P_NODE_83028_length_245_cov_3.627907_g82325_i0 | PRJNA1068830 | 83028 | 245 | 3.627907 | 8.88837215 | Verrucomicrobiia bacterium Tous-C3TDCM | 1982330 | Bacteria | Bacteria | 44.3 | 0.0107 | NR | PAW61727.1 | 1982330 | g82325 | i0 | 34.7 | 0.918367346938776 | 75 | 49 | 91.8 | 0 | 2 | 226 | 324 | 398 | PAW61727.1 MAG: RIP metalloprotease RseP [Verrucomicrobiia bacterium Tous-C3TDCM] | diamond | 225 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium Tous-C3TDCM | ||||
| 31489664 | 31489664 | PRJNA1068830_P_NODE_24696_length_471_cov_1.070352_g23995_i0 | PRJNA1068830 | 24696 | 471 | 1.070352 | 5.04135792 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 163 | 1.34e-47 | NR | MAD23566.1 | 2026801 | g23995 | i0 | 59 | 0.853503184713376 | 134 | 50 | 82.2 | 1 | 402 | 16 | 1 | 134 | MAD23566.1 thymidylate synthase (FAD) [Verrucomicrobiales bacterium] | diamond | 402 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 31837185 | 31837185 | PRJNA1068830_P_NODE_76417_length_250_cov_1.305085_g75714_i0 | PRJNA1068830 | 76417 | 250 | 1.305085 | 3.2627125 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 52.4 | 1.08e-5 | NR | HXT85908.1 | 2499141 | g75714 | i0 | 37.1 | 0.744 | 62 | 38 | 74.4 | 1 | 3 | 188 | 167 | 227 | HXT85908.1 lipid-binding SYLF domain-containing protein [Verrucomicrobiia bacterium] | diamond | 186 | 52.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31932132 | 31932132 | PRJNA1068830_P_NODE_25357_length_463_cov_1.748718_g24655_i0 | PRJNA1068830 | 25357 | 463 | 1.748718 | 8.09656434 | Methylacidimicrobium sp. B4 | 2796139 | Bacteria | Bacteria | 277 | 3.3499999999999998e-90 | NR | WP_206863961.1 | 2796139 | g24655 | i0 | 90.9 | 1.97624190064795 | 154 | 14 | 99.8 | 0 | 462 | 1 | 194 | 347 | WP_206863961.1 IS256 family transposase [Methylacidimicrobium sp. B4] | diamond | 915 | 277 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidimicrobium | Methylacidimicrobium sp. B4 | ||||
| 32090483 | 32090483 | PRJNA1068830_P_NODE_65018_length_269_cov_1.326531_g64315_i0 | PRJNA1068830 | 65018 | 269 | 1.326531 | 3.56836839 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 81.3 | 9.86e-16 | NR | NNE90836.1 | 2026801 | g64315 | i0 | 47.7 | 1.97397769516729 | 88 | 43 | 98.1 | 2 | 264 | 1 | 64 | 148 | NNE90836.1 2-aminoethylphosphonate--pyruvate transaminase [Verrucomicrobiales bacterium] | diamond | 531 | 81.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;