contig_metadata
36 rows where analysis = "diamond", bioproject = "PRJNA1068830" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182829 | 182829 | PRJNA1068830_P_NODE_43361_length_336_cov_1.186312_g42658_i0 | PRJNA1068830 | 43361 | 336 | 1.186312 | 3.98600832 | uncultured Helicobacter sp. | 175537 | Bacteria | Bacteria | 181 | 1.51e-52 | NR | WP_297814130.1 | 175537 | g42658 | i0 | 96.8 | 0.839285714285714 | 94 | 3 | 83.9 | 0 | 282 | 1 | 1 | 94 | WP_297814130.1 type VI secretion system baseplate subunit TssK [uncultured Helicobacter sp.] | diamond | 282 | 181 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | uncultured Helicobacter sp. | ||
| 26782694 | 26782694 | PRJNA1068830_P_NODE_73921_length_252_cov_0.871508_g73218_i0 | PRJNA1068830 | 73921 | 252 | 0.871508 | 2.19620016 | Helicobacter | 209 | Bacteria | Bacteria | 94 | 4.7399999999999997e-23 | NR | WP_115551819.1 | 209 | g73218 | i0 | 100 | 0.547619047619048 | 46 | 0 | 54.8 | 0 | 251 | 114 | 38 | 83 | WP_115551819.1 MULTISPECIES: RNA-binding S4 domain-containing protein [Helicobacter] | diamond | 138 | 94 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 27098913 | 27098913 | PRJNA1068830_P_NODE_75362_length_251_cov_0.876404_g74659_i0 | PRJNA1068830 | 75362 | 251 | 0.876404 | 2.19977404 | Aliarcobacter cryaerophilus | 28198 | Bacteria | Bacteria | 43.5 | 0.00731 | NR | WP_105925513.1 | 28198 | g74659 | i0 | 73.9 | 0.274900398406374 | 23 | 6 | 27.5 | 0 | 251 | 183 | 101 | 123 | WP_105925513.1 hypothetical protein [Aliarcobacter cryaerophilus] | diamond | 69 | 43.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter cryaerophilus | ||
| 27320289 | 27320289 | PRJNA1068830_P_NODE_55683_length_292_cov_1.068493_g54980_i0 | PRJNA1068830 | 55683 | 292 | 1.068493 | 3.11999956 | Helicobacter | 209 | Bacteria | Bacteria | 189 | 2.5199999999999997e-56 | NR | WP_300806490.1 | 209 | g54980 | i0 | 100 | 0.996575342465753 | 97 | 0 | 99.7 | 0 | 292 | 2 | 293 | 389 | WP_300806490.1 MULTISPECIES: type VI secretion system domain-containing protein, partial [Helicobacter] | diamond | 291 | 189 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 27604609 | 27604609 | PRJNA1068830_P_NODE_76984_length_250_cov_0.881356_g76281_i0 | PRJNA1068830 | 76984 | 250 | 0.881356 | 2.20339 | Helicobacter ganmani | 60246 | Bacteria | Bacteria | 42.4 | 0.0218 | NR | WP_416829653.1 | 60246 | g76281 | i0 | 100 | 0.264 | 22 | 0 | 26.4 | 0 | 185 | 250 | 1 | 22 | WP_416829653.1 nitrate- and nitrite sensing domain-containing protein, partial [Helicobacter ganmani] | diamond | 66 | 42.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 27691100 | 27691100 | PRJNA1068830_P_NODE_50764_length_307_cov_1.666667_g50061_i0 | PRJNA1068830 | 50764 | 307 | 1.666667 | 5.11666769 | Arcobacteraceae | 2808963 | Bacteria | Bacteria | 110 | 5.77e-26 | NR | WP_076082840.1 | 1850254 | g50061 | i0 | 59.1 | 6.29315960912052 | 93 | 37 | 89.9 | 1 | 30 | 305 | 333 | 425 | WP_076082840.1 PhoH family protein [Poseidonibacter parvus] | diamond | 1932 | 110 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Poseidonibacter | Poseidonibacter parvus | ||
| 27754095 | 27754095 | PRJNA1068830_P_NODE_88464_length_242_cov_0.923077_g87761_i0 | PRJNA1068830 | 88464 | 242 | 0.923077 | 2.23384634 | Nitratiruptor | 269258 | Bacteria | Bacteria | 80.9 | 1.37e-15 | NR | WP_370583958.1 | 2724897 | g87761 | i0 | 62.7 | 1.66115702479339 | 67 | 24 | 81.8 | 1 | 3 | 200 | 265 | 331 | WP_370583958.1 NHL repeat-containing protein [Nitratiruptor sp. YY08-10] | diamond | 402 | 80.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Nautiliales | Nitratiruptoraceae | Nitratiruptor | Nitratiruptor sp. YY08-10 | ||
| 28069599 | 28069599 | PRJNA1068830_P_NODE_87205_length_243_cov_0.917647_g86502_i0 | PRJNA1068830 | 87205 | 243 | 0.917647 | 2.22988221 | Helicobacter | 209 | Bacteria | Bacteria | 102 | 3.5300000000000003e-26 | NR | WP_301009253.1 | 209 | g86502 | i0 | 100 | 4.40740740740741 | 51 | 0 | 63 | 0 | 153 | 1 | 1 | 51 | WP_301009253.1 MULTISPECIES: hypothetical protein [Helicobacter] | diamond | 1071 | 102 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 28290488 | 28290488 | PRJNA1068830_P_NODE_83946_length_245_cov_0.906977_g83243_i0 | PRJNA1068830 | 83946 | 245 | 0.906977 | 2.22209365 | Helicobacter | 209 | Bacteria | Bacteria | 148 | 5.089999999999998e-41 | NR | WP_115550714.1 | 60246 | g83243 | i0 | 100 | 2.97551020408163 | 81 | 0 | 99.2 | 0 | 245 | 3 | 27 | 107 | WP_115550714.1 metallophosphoesterase [Helicobacter ganmani] | diamond | 729 | 148 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 28393708 | 28393708 | PRJNA1068830_P_NODE_19606_length_540_cov_2.616702_g18908_i0 | PRJNA1068830 | 19606 | 540 | 2.616702 | 14.1301908 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 46.6 | 0.0252 | NR | WP_311337590.1 | 827 | g18908 | i0 | 30.6 | 1.23888888888889 | 121 | 66 | 62.2 | 3 | 461 | 126 | 197 | 308 | WP_311337590.1 relaxase/mobilization nuclease domain-containing protein [Campylobacter ureolyticus] | diamond | 669 | 46.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 28709681 | 28709681 | PRJNA1068830_P_NODE_52087_length_303_cov_1.160870_g51384_i0 | PRJNA1068830 | 52087 | 303 | 1.16087 | 3.5174361 | Sulfurovum sp. | 1969726 | Bacteria | Bacteria | 202 | 4.07e-60 | NR | MDD3500783.1 | 1969726 | g51384 | i0 | 97 | 0.99009900990099 | 100 | 3 | 99 | 0 | 301 | 2 | 346 | 445 | MDD3500783.1 group II intron reverse transcriptase/maturase [Sulfurovum sp.] | diamond | 300 | 202 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. | ||
| 28898794 | 28898794 | PRJNA1068830_P_NODE_81088_length_247_cov_0.896552_g80385_i0 | PRJNA1068830 | 81088 | 247 | 0.896552 | 2.21448344 | Helicobacter | 209 | Bacteria | Bacteria | 92.8 | 1.0300000000000001e-22 | NR | WP_115552208.1 | 209 | g80385 | i0 | 95.7 | 0.57085020242915 | 47 | 2 | 57.1 | 0 | 143 | 3 | 1 | 47 | WP_115552208.1 MULTISPECIES: FeoA family protein [Helicobacter] | diamond | 141 | 92.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 29048549 | 29048549 | PRJNA1068830_P_NODE_86408_length_243_cov_1.376471_g85705_i0 | PRJNA1068830 | 86408 | 243 | 1.376471 | 3.34482453 | Helicobacter | 209 | Bacteria | Bacteria | 155 | 2.74e-45 | NR | WP_301009432.1 | 209 | g85705 | i0 | 100 | 3.95061728395062 | 80 | 0 | 98.8 | 0 | 2 | 241 | 88 | 167 | WP_301009432.1 MULTISPECIES: PAS domain-containing protein, partial [Helicobacter] | diamond | 960 | 155 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 29056946 | 29056946 | PRJNA1068830_P_NODE_74828_length_251_cov_1.747191_g74125_i0 | PRJNA1068830 | 74828 | 251 | 1.747191 | 4.38544941 | Campylobacter mucosalis | 202 | Bacteria | Bacteria | 53.1 | 8.65e-6 | NR | WP_169764606.1 | 202 | g74125 | i0 | 42.9 | 0.836653386454183 | 70 | 36 | 83.7 | 1 | 214 | 5 | 357 | 422 | WP_169764606.1 AMP-binding protein [Campylobacter mucosalis] | diamond | 210 | 53.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter mucosalis | ||
| 29711091 | 29711091 | PRJNA1068830_P_NODE_80990_length_247_cov_0.896552_g80287_i0 | PRJNA1068830 | 80990 | 247 | 0.896552 | 2.21448344 | Helicobacter | 209 | Bacteria | Bacteria | 162 | 2.51e-47 | NR | WP_290882045.1 | 218 | g80287 | i0 | 98.8 | 1.9919028340081 | 82 | 1 | 99.6 | 0 | 246 | 1 | 61 | 142 | WP_290882045.1 hypothetical protein [Helicobacter sp.] | diamond | 492 | 162 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 29932730 | 29932730 | PRJNA1068830_P_NODE_37951_length_363_cov_1.493103_g37248_i0 | PRJNA1068830 | 37951 | 363 | 1.493103 | 5.41996389 | Campylobacter | 194 | Bacteria | Bacteria | 57 | 7.29e-8 | NR | EAJ2917428.1 | 195 | g37248 | i0 | 46.3 | 1.33884297520661 | 54 | 29 | 44.6 | 0 | 200 | 361 | 1 | 54 | EAJ2917428.1 hypothetical protein [Campylobacter coli] | diamond | 486 | 57 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 30288900 | 30288900 | PRJNA1068830_P_NODE_57492_length_287_cov_1.355140_g56789_i0 | PRJNA1068830 | 57492 | 287 | 1.35514 | 3.8892518 | Helicobacter | 209 | Bacteria | Bacteria | 186 | 1.89e-53 | NR | WP_115552021.1 | 209 | g56789 | i0 | 98.9 | 0.993031358885017 | 95 | 1 | 99.3 | 0 | 1 | 285 | 270 | 364 | WP_115552021.1 MULTISPECIES: asparagine synthase (glutamine-hydrolyzing) [Helicobacter] | diamond | 285 | 186 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 30383708 | 30383708 | PRJNA1068830_P_NODE_79433_length_248_cov_0.891429_g78730_i0 | PRJNA1068830 | 79433 | 248 | 0.891429 | 2.21074392 | Helicobacter ganmani | 60246 | Bacteria | Bacteria | 163 | 2.43e-47 | NR | WP_297600217.1 | 60246 | g78730 | i0 | 100 | 0.991935483870968 | 82 | 0 | 99.2 | 0 | 248 | 3 | 32 | 113 | WP_297600217.1 glycosyltransferase family 2 protein [Helicobacter ganmani] | diamond | 246 | 163 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 30415223 | 30415223 | PRJNA1068830_P_NODE_25913_length_457_cov_1.015625_g25211_i0 | PRJNA1068830 | 25913 | 457 | 1.015625 | 4.64140625 | Helicobacter | 209 | Bacteria | Bacteria | 129 | 3.76e-36 | NR | WP_115551535.1 | 209 | g25211 | i0 | 95.3 | 0.420131291028446 | 64 | 3 | 42 | 0 | 207 | 16 | 1 | 64 | WP_115551535.1 MULTISPECIES: hypothetical protein [Helicobacter] | diamond | 192 | 129 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 30564122 | 30564122 | PRJNA1068830_P_NODE_74213_length_252_cov_0.871508_g73510_i0 | PRJNA1068830 | 74213 | 252 | 0.871508 | 2.19620016 | Helicobacter | 209 | Bacteria | Bacteria | 119 | 2.26e-33 | NR | WP_300827224.1 | 209 | g73510 | i0 | 98.3 | 5.52380952380952 | 58 | 1 | 69 | 0 | 3 | 176 | 17 | 74 | WP_300827224.1 MULTISPECIES: ATP-binding domain-containing protein [Helicobacter] | diamond | 1392 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 30595856 | 30595856 | PRJNA1068830_P_NODE_72533_length_253_cov_0.866667_g71830_i0 | PRJNA1068830 | 72533 | 253 | 0.866667 | 2.19266751 | Helicobacter | 209 | Bacteria | Bacteria | 72.4 | 2.01e-14 | NR | WP_300674629.1 | 209 | g71830 | i0 | 100 | 1.80237154150198 | 38 | 0 | 45.1 | 0 | 115 | 2 | 1 | 38 | WP_300674629.1 MULTISPECIES: DUF520 family protein, partial [Helicobacter] | diamond | 456 | 72.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 30793927 | 30793927 | PRJNA1068830_P_NODE_44994_length_329_cov_1.218750_g44291_i0 | PRJNA1068830 | 44994 | 329 | 1.21875 | 4.0096875 | Helicobacter sp. | 218 | Bacteria | Bacteria | 204 | 2.69e-59 | NR | WP_290880637.1 | 218 | g44291 | i0 | 90.8 | 0.993920972644377 | 109 | 10 | 99.4 | 0 | 327 | 1 | 18 | 126 | WP_290880637.1 hypothetical protein [Helicobacter sp.] | diamond | 327 | 204 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. | ||
| 30825568 | 30825568 | PRJNA1068830_P_NODE_30534_length_413_cov_1.147059_g29831_i0 | PRJNA1068830 | 30534 | 413 | 1.147059 | 4.73735367 | Helicobacter sp. UBA34 | 218 | Bacteria | Bacteria | 265 | 7.57e-88 | NR | WP_301008717.1 | 1946588 | g29831 | i0 | 100 | 0.995157384987893 | 137 | 0 | 99.5 | 0 | 1 | 411 | 21 | 157 | WP_301008717.1 TetR/AcrR family transcriptional regulator, partial [Helicobacter sp. UBA3407] | diamond | 411 | 265 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. UBA3407 | ||
| 31015187 | 31015187 | PRJNA1068830_P_NODE_71295_length_255_cov_1.241758_g70592_i0 | PRJNA1068830 | 71295 | 255 | 1.241758 | 3.1664829 | Helicobacter sp. MIT | 218 | Bacteria | Bacteria | 72.4 | 9.56e-13 | NR | WP_138121674.1 | 1548150 | g70592 | i0 | 85.7 | 0.494117647058824 | 42 | 6 | 49.4 | 0 | 225 | 100 | 272 | 313 | WP_138121674.1 malate dehydrogenase [Helicobacter sp. MIT 05-5294] | diamond | 126 | 72.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. MIT 05-5294 | ||
| 31047082 | 31047082 | PRJNA1068830_P_NODE_35675_length_376_cov_1.646865_g34972_i0 | PRJNA1068830 | 35675 | 376 | 1.646865 | 6.1922124 | Sulfurovum sp. | 1969726 | Bacteria | Bacteria | 160 | 9.3e-45 | NR | MEN8718491.1 | 1969726 | g34972 | i0 | 80.6 | 1.48404255319149 | 93 | 18 | 74.2 | 0 | 376 | 98 | 322 | 414 | MEN8718491.1 hypothetical protein [Sulfurovum sp.] | diamond | 558 | 160 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurovaceae | Sulfurovum | Sulfurovum sp. | ||
| 31268055 | 31268055 | PRJNA1068830_P_NODE_74975_length_251_cov_1.353933_g74272_i0 | PRJNA1068830 | 74975 | 251 | 1.353933 | 3.39837183 | Aliarcobacter butzleri | 28197 | Bacteria | Bacteria | 88.2 | 2.86e-20 | NR | WP_260879532.1 | 28197 | g74272 | i0 | 60.7 | 0.729083665338645 | 61 | 24 | 72.9 | 0 | 249 | 67 | 63 | 123 | WP_260879532.1 hypothetical protein [Aliarcobacter butzleri] | diamond | 183 | 88.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 31299611 | 31299611 | PRJNA1068830_P_NODE_32675_length_397_cov_0.870370_g31972_i0 | PRJNA1068830 | 32675 | 397 | 0.87037 | 3.4553689 | Helicobacter ganmani | 60246 | Bacteria | Bacteria | 126 | 3.4399999999999996e-35 | NR | WP_416860183.1 | 60246 | g31972 | i0 | 95.7 | 1.06549118387909 | 70 | 3 | 52.9 | 0 | 215 | 6 | 1 | 70 | WP_416860183.1 hypothetical protein [Helicobacter ganmani] | diamond | 423 | 126 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 31552958 | 31552958 | PRJNA1068830_P_NODE_85076_length_244_cov_0.912281_g84373_i0 | PRJNA1068830 | 85076 | 244 | 0.912281 | 2.22596564 | Helicobacter | 209 | Bacteria | Bacteria | 154 | 3.0699999999999992e-43 | NR | WP_115551231.1 | 209 | g84373 | i0 | 100 | 1.9672131147541 | 80 | 0 | 98.4 | 0 | 5 | 244 | 1 | 80 | WP_115551231.1 MULTISPECIES: amidohydrolase family protein [Helicobacter] | diamond | 480 | 154 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 31639013 | 31639013 | PRJNA1068830_P_NODE_34356_length_385_cov_1.346154_g33653_i0 | PRJNA1068830 | 34356 | 385 | 1.346154 | 5.1826929 | Helicobacter | 209 | Bacteria | Bacteria | 254 | 2.12e-82 | NR | WP_115551241.1 | 209 | g33653 | i0 | 100 | 1.97922077922078 | 127 | 0 | 99 | 0 | 383 | 3 | 87 | 213 | WP_115551241.1 MULTISPECIES: endolytic transglycosylase MltG [Helicobacter] | diamond | 762 | 254 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 31805690 | 31805690 | PRJNA1068830_P_NODE_75397_length_251_cov_0.876404_g74694_i0 | PRJNA1068830 | 75397 | 251 | 0.876404 | 2.19977404 | Helicobacter | 209 | Bacteria | Bacteria | 159 | 3.92e-45 | NR | WP_297578836.1 | 209 | g74694 | i0 | 100 | 0.99203187250996006 | 83 | 0 | 99.2 | 0 | 250 | 2 | 195 | 277 | WP_297578836.1 MULTISPECIES: aminoacetone oxidase family FAD-binding enzyme [Helicobacter] | diamond | 249 | 159 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 31868880 | 31868880 | PRJNA1068830_P_NODE_41617_length_344_cov_1.151292_g40914_i0 | PRJNA1068830 | 41617 | 344 | 1.151292 | 3.96044448 | Helicobacter | 209 | Bacteria | Bacteria | 152 | 2.4799999999999993e-42 | NR | WP_297599876.1 | 209 | g40914 | i0 | 100 | 0.680232558139535 | 78 | 0 | 68 | 0 | 2 | 235 | 299 | 376 | WP_297599876.1 MULTISPECIES: glycosyltransferase family 4 protein [Helicobacter] | diamond | 234 | 152 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | |||
| 32249020 | 32249020 | PRJNA1068830_P_NODE_57518_length_287_cov_1.275701_g56815_i0 | PRJNA1068830 | 57518 | 287 | 1.275701 | 3.66126187 | unclassified Campylobacter | 2593542 | Bacteria | Bacteria | 95.1 | 9.09e-21 | NR | WP_270862637.1 | 2593542 | g56815 | i0 | 52.6 | 3.97212543554007 | 95 | 45 | 99.3 | 0 | 285 | 1 | 244 | 338 | WP_270862637.1 MULTISPECIES: DNA-methyltransferase [unclassified Campylobacter] | diamond | 1140 | 95.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | |||
| 32312278 | 32312278 | PRJNA1068830_P_NODE_66959_length_264_cov_2.026178_g66256_i0 | PRJNA1068830 | 66959 | 264 | 2.026178 | 5.34910992 | Helicobacter ganmani | 60246 | Bacteria | Bacteria | 179 | 1.1399999999999999e-54 | NR | WP_416860715.1 | 60246 | g66256 | i0 | 97.7 | 1 | 88 | 2 | 100 | 0 | 1 | 264 | 95 | 182 | WP_416860715.1 AzlC family ABC transporter permease [Helicobacter ganmani] | diamond | 264 | 179 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter ganmani | ||
| 32470403 | 32470403 | PRJNA1068830_P_NODE_81979_length_246_cov_1.352601_g81276_i0 | PRJNA1068830 | 81979 | 246 | 1.352601 | 3.32739846 | Helicobacter sp. UBA34 | 218 | Bacteria | Bacteria | 73.2 | 7.14e-13 | NR | WP_301008030.1 | 1946588 | g81276 | i0 | 97.1 | 0.426829268292683 | 35 | 1 | 42.7 | 0 | 1 | 105 | 401 | 435 | WP_301008030.1 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, partial [Helicobacter sp. UBA3407] | diamond | 105 | 73.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. UBA3407 | ||
| 32596702 | 32596702 | PRJNA1068830_P_NODE_78200_length_249_cov_0.886364_g77497_i0 | PRJNA1068830 | 78200 | 249 | 0.886364 | 2.20704636 | Campylobacter geochelonis | 1780362 | Bacteria | Bacteria | 52.8 | 8.07e-7 | NR | WP_075495202.1 | 1780362 | g77497 | i0 | 68.4 | 0.951807228915663 | 38 | 12 | 45.8 | 0 | 136 | 249 | 1 | 38 | WP_075495202.1 acyl carrier protein [Campylobacter geochelonis] | diamond | 237 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter geochelonis | ||
| 32848432 | 32848432 | PRJNA1068830_P_NODE_69760_length_258_cov_1.513514_g69057_i0 | PRJNA1068830 | 69760 | 258 | 1.513514 | 3.90486612 | Helicobacter sp. MIT 11-5569 | 1548151 | Bacteria | Bacteria | 125 | 2.09e-33 | NR | WP_034287773.1 | 1548151 | g69057 | i0 | 86.8 | 1.58139534883721 | 68 | 9 | 79.1 | 0 | 3 | 206 | 190 | 257 | WP_034287773.1 ferredoxin-type protein NapG [Helicobacter sp. MIT 11-5569] | diamond | 408 | 125 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. MIT 11-5569 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;