RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1068830" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA1068830 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28015042 28015042 PRJNA1068830_P_NODE_52385_length_302_cov_1.021834_g51682_i0 PRJNA1068830 52385 302 1.021834 3.08593868 Staphylothermus sp. 2820299 Archaea Archaea 66.6 1.3099999999999999e-10   NR MCD6195324.1 2820299 g51682 i0 41.5 1.05298013245033 106 50 96.4 6 302 12 66 168 MCD6195324.1 ribonuclease Z [Staphylothermus sp.] diamond 318 66.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Staphylothermus Staphylothermus sp.
30478197 30478197 PRJNA1068830_P_NODE_8433_length_879_cov_2.266749_g7834_i0 PRJNA1068830 8433 879 2.266749 19.92472371 Zestosphaera sp. 2303494 Archaea Archaea 441 1.1099999999999999e-151   NR MFN3268367.1 2303494 g7834 i0 96.1 0.784982935153584 230 9 78.5 0 877 188 201 430 MFN3268367.1 RNA-guided endonuclease InsQ/TnpB family protein [Zestosphaera sp.] diamond 690 441 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Zestosphaera Zestosphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;