contig_metadata
25 rows where analysis = "diamond", bioproject = "PRJNA1068830" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15486463 | 15486463 | PRJNA1068830_P_NODE_82653_length_246_cov_0.901734_g81950_i0 | PRJNA1068830 | 82653 | 246 | 0.901734 | 2.21826564 | Akkermansia glycaniphila | 1679444 | Bacteria | Bacteria | 82 | 5.33e-18 | NR | OCA02583.1 | 1679444 | g81950 | i0 | 95.3 | 1.04878048780488 | 43 | 2 | 52.4 | 0 | 246 | 118 | 71 | 113 | OCA02583.1 transposase [Akkermansia glycaniphila] | diamond | 258 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia glycaniphila | |
| 27098914 | 27098914 | PRJNA1068830_P_NODE_78602_length_249_cov_0.886364_g77899_i0 | PRJNA1068830 | 78602 | 249 | 0.886364 | 2.20704636 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 57.4 | 2.62e-7 | NR | MBV9009557.1 | 2026799 | g77899 | i0 | 53.7 | 2.12048192771084 | 54 | 24 | 65.1 | 1 | 2 | 163 | 82 | 134 | MBV9009557.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 528 | 57.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27193650 | 27193650 | PRJNA1068830_P_NODE_74542_length_252_cov_0.871508_g73839_i0 | PRJNA1068830 | 74542 | 252 | 0.871508 | 2.19620016 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 58.9 | 6.36e-8 | NR | HEX5103081.1 | 2699754 | g73839 | i0 | 46.7 | 0.714285714285714 | 60 | 32 | 71.4 | 0 | 26 | 205 | 5 | 64 | HEX5103081.1 serine/threonine-protein kinase [Pirellulaceae bacterium] | diamond | 180 | 58.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 27225190 | 27225190 | PRJNA1068830_P_NODE_61603_length_277_cov_1.343137_g60900_i0 | PRJNA1068830 | 61603 | 277 | 1.343137 | 3.72048949 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 47 | 0.00166 | NR | MBI3861953.1 | 2052181 | g60900 | i0 | 77.8 | 0.292418772563177 | 27 | 6 | 29.2 | 0 | 3 | 83 | 143 | 169 | MBI3861953.1 hypothetical protein [Planctomycetia bacterium] | diamond | 81 | 47 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 27541384 | 27541384 | PRJNA1068830_P_NODE_70124_length_257_cov_1.695652_g69421_i0 | PRJNA1068830 | 70124 | 257 | 1.695652 | 4.35782564 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 42.7 | 0.045 | NR | HEY1764242.1 | 2006848 | g69421 | i0 | 33.8 | 0.793774319066148 | 68 | 37 | 70 | 2 | 47 | 226 | 499 | 566 | HEY1764242.1 right-handed parallel beta-helix repeat-containing protein [Opitutaceae bacterium] | diamond | 204 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 27793998 | 27793998 | PRJNA1068830_P_NODE_15404_length_623_cov_3.160000_g14725_i0 | PRJNA1068830 | 15404 | 623 | 3.16 | 19.6868 | Crateriforma spongiae | 2724528 | Bacteria | Bacteria | 161 | 6.86e-44 | NR | WP_168565541.1 | 2724528 | g14725 | i0 | 51.2 | 2.51364365971108 | 168 | 79 | 79.5 | 1 | 9 | 503 | 207 | 374 | WP_168565541.1 galactokinase [Crateriforma spongiae] | diamond | 1566 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Crateriforma | Crateriforma spongiae | |
| 27794031 | 27794031 | PRJNA1068830_P_NODE_84084_length_245_cov_0.906977_g83381_i0 | PRJNA1068830 | 84084 | 245 | 0.906977 | 2.22209365 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 133 | 1.41e-35 | NR | MDD5421816.1 | 2035772 | g83381 | i0 | 77.8 | 1.9469387755102 | 81 | 18 | 99.2 | 0 | 2 | 244 | 211 | 291 | MDD5421816.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Candidatus Omnitrophota bacterium] | diamond | 477 | 133 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 27943429 | 27943429 | PRJNA1068830_P_NODE_87865_length_242_cov_1.443787_g87162_i0 | PRJNA1068830 | 87865 | 242 | 1.443787 | 3.49396454 | Bacteria | 2 | Bacteria | Bacteria | 91.3 | 1.25e-19 | NR | HBH51526.1 | 2026779 | g87162 | i0 | 54.4 | 4.94628099173554 | 79 | 36 | 97.9 | 0 | 4 | 240 | 72 | 150 | HBH51526.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 1197 | 91.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 28101057 | 28101057 | PRJNA1068830_P_NODE_83745_length_245_cov_0.906977_g83042_i0 | PRJNA1068830 | 83745 | 245 | 0.906977 | 2.22209365 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 3.19e-6 | NR | MCX6961305.1 | 2026799 | g83042 | i0 | 42.7 | 6.24489795918367 | 75 | 39 | 86.9 | 2 | 7 | 219 | 104 | 178 | MCX6961305.1 YbjN domain-containing protein [Verrucomicrobiota bacterium] | diamond | 1530 | 53.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28551817 | 28551817 | PRJNA1068830_P_NODE_58887_length_283_cov_3.938095_g58184_i0 | PRJNA1068830 | 58887 | 283 | 3.938095 | 11.14480885 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 104 | 6.88e-27 | NR | MFO7821374.1 | 2053569 | g58184 | i0 | 65.8 | 1.72791519434629 | 79 | 27 | 83.7 | 0 | 247 | 11 | 4 | 82 | MFO7821374.1 RNA-binding protein [Lentisphaeria bacterium] | diamond | 489 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 28606322 | 28606322 | PRJNA1068830_P_NODE_86647_length_243_cov_0.917647_g85944_i0 | PRJNA1068830 | 86647 | 243 | 0.917647 | 2.22988221 | Bacteria | 2 | Bacteria | Bacteria | 140 | 5.54e-38 | NR | MBI4658269.1 | 2026799 | g85944 | i0 | 77.8 | 9 | 81 | 18 | 100 | 0 | 1 | 243 | 288 | 368 | MBI4658269.1 terpene cyclase/mutase family protein [Verrucomicrobiota bacterium] | diamond | 2187 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28804005 | 28804005 | PRJNA1068830_P_NODE_83028_length_245_cov_3.627907_g82325_i0 | PRJNA1068830 | 83028 | 245 | 3.627907 | 8.88837215 | Verrucomicrobiia bacterium Tous-C3TDCM | 1982330 | Bacteria | Bacteria | 44.3 | 0.0107 | NR | PAW61727.1 | 1982330 | g82325 | i0 | 34.7 | 0.918367346938776 | 75 | 49 | 91.8 | 0 | 2 | 226 | 324 | 398 | PAW61727.1 MAG: RIP metalloprotease RseP [Verrucomicrobiia bacterium Tous-C3TDCM] | diamond | 225 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium Tous-C3TDCM | ||||
| 30383711 | 30383711 | PRJNA1068830_P_NODE_84253_length_245_cov_0.906977_g83550_i0 | PRJNA1068830 | 84253 | 245 | 0.906977 | 2.22209365 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 137 | 2.55e-36 | NR | MDZ4782843.1 | 2052181 | g83550 | i0 | 77.8 | 0.991836734693878 | 81 | 18 | 99.2 | 0 | 245 | 3 | 139 | 219 | MDZ4782843.1 MlaD family protein [Planctomycetia bacterium] | diamond | 243 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 30532793 | 30532793 | PRJNA1068830_P_NODE_72993_length_253_cov_0.866667_g72290_i0 | PRJNA1068830 | 72993 | 253 | 0.866667 | 2.19266751 | Planctomycetia | 203683 | Bacteria | Bacteria | 51.2 | 4.28e-5 | NR | MFM7041767.1 | 2026779 | g72290 | i0 | 37 | 7.70750988142292 | 81 | 46 | 96 | 2 | 246 | 4 | 235 | 310 | MFM7041767.1 M66 family metalloprotease [Planctomycetaceae bacterium] | diamond | 1950 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30857180 | 30857180 | PRJNA1068830_P_NODE_86574_length_243_cov_0.917647_g85871_i0 | PRJNA1068830 | 86574 | 243 | 0.917647 | 2.22988221 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 108 | 1.54e-25 | NR | MDZ4779337.1 | 2052181 | g85871 | i0 | 64.2 | 1 | 81 | 29 | 100 | 0 | 1 | 243 | 440 | 520 | MDZ4779337.1 lipopolysaccharide kinase InaA family protein [Planctomycetia bacterium] | diamond | 243 | 108 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 31047097 | 31047097 | PRJNA1068830_P_NODE_61155_length_278_cov_1.521951_g60452_i0 | PRJNA1068830 | 61155 | 278 | 1.521951 | 4.23102378 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 102 | 3.649999999999999e-23 | NR | MDA7937840.1 | 2715253 | g60452 | i0 | 58.9 | 0.971223021582734 | 90 | 37 | 97.1 | 0 | 7 | 276 | 64 | 153 | MDA7937840.1 threonine ammonia-lyase [Pirellulales bacterium] | diamond | 270 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 31489664 | 31489664 | PRJNA1068830_P_NODE_24696_length_471_cov_1.070352_g23995_i0 | PRJNA1068830 | 24696 | 471 | 1.070352 | 5.04135792 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 163 | 1.34e-47 | NR | MAD23566.1 | 2026801 | g23995 | i0 | 59 | 0.853503184713376 | 134 | 50 | 82.2 | 1 | 402 | 16 | 1 | 134 | MAD23566.1 thymidylate synthase (FAD) [Verrucomicrobiales bacterium] | diamond | 402 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 31670722 | 31670722 | PRJNA1068830_P_NODE_57137_length_288_cov_1.381395_g56434_i0 | PRJNA1068830 | 57137 | 288 | 1.381395 | 3.9784176 | Bacteria | 2 | Bacteria | Bacteria | 54.7 | 4.04e-6 | NR | MEY3460111.1 | 2026780 | g56434 | i0 | 52.8 | 1.75 | 53 | 25 | 55.2 | 0 | 273 | 115 | 509 | 561 | MEY3460111.1 hypothetical protein [Planctomycetota bacterium] | diamond | 504 | 55.1 | 0.992740471869329 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31837185 | 31837185 | PRJNA1068830_P_NODE_76417_length_250_cov_1.305085_g75714_i0 | PRJNA1068830 | 76417 | 250 | 1.305085 | 3.2627125 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 52.4 | 1.08e-5 | NR | HXT85908.1 | 2499141 | g75714 | i0 | 37.1 | 0.744 | 62 | 38 | 74.4 | 1 | 3 | 188 | 167 | 227 | HXT85908.1 lipid-binding SYLF domain-containing protein [Verrucomicrobiia bacterium] | diamond | 186 | 52.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31932132 | 31932132 | PRJNA1068830_P_NODE_25357_length_463_cov_1.748718_g24655_i0 | PRJNA1068830 | 25357 | 463 | 1.748718 | 8.09656434 | Methylacidimicrobium sp. B4 | 2796139 | Bacteria | Bacteria | 277 | 3.3499999999999998e-90 | NR | WP_206863961.1 | 2796139 | g24655 | i0 | 90.9 | 1.97624190064795 | 154 | 14 | 99.8 | 0 | 462 | 1 | 194 | 347 | WP_206863961.1 IS256 family transposase [Methylacidimicrobium sp. B4] | diamond | 915 | 277 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidimicrobium | Methylacidimicrobium sp. B4 | ||||
| 32090477 | 32090477 | PRJNA1068830_P_NODE_55918_length_291_cov_1.431193_g55215_i0 | PRJNA1068830 | 55918 | 291 | 1.431193 | 4.16477163 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 196 | 6.32e-60 | NR | MFA7054871.1 | 2212473 | g55215 | i0 | 94.8 | 0.989690721649485 | 96 | 5 | 99 | 0 | 3 | 290 | 97 | 192 | MFA7054871.1 RRXRR domain-containing protein [Kiritimatiellia bacterium] | diamond | 288 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 32090483 | 32090483 | PRJNA1068830_P_NODE_65018_length_269_cov_1.326531_g64315_i0 | PRJNA1068830 | 65018 | 269 | 1.326531 | 3.56836839 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 81.3 | 9.86e-16 | NR | NNE90836.1 | 2026801 | g64315 | i0 | 47.7 | 1.97397769516729 | 88 | 43 | 98.1 | 2 | 264 | 1 | 64 | 148 | NNE90836.1 2-aminoethylphosphonate--pyruvate transaminase [Verrucomicrobiales bacterium] | diamond | 531 | 81.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 32153812 | 32153812 | PRJNA1068830_P_NODE_72498_length_253_cov_0.866667_g71795_i0 | PRJNA1068830 | 72498 | 253 | 0.866667 | 2.19266751 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 141 | 5.679999999999999e-37 | NR | MBL8014117.1 | 2035772 | g71795 | i0 | 81.7 | 1.94466403162055 | 82 | 15 | 97.2 | 0 | 3 | 248 | 341 | 422 | MBL8014117.1 ATP-dependent DNA helicase RecG [Candidatus Omnitrophota bacterium] | diamond | 492 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 32659298 | 32659298 | PRJNA1068830_P_NODE_85280_length_244_cov_0.912281_g84577_i0 | PRJNA1068830 | 85280 | 244 | 0.912281 | 2.22596564 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 42.7 | 0.0384 | NR | MCI0362211.1 | 2026779 | g84577 | i0 | 39.6 | 0.590163934426229 | 48 | 26 | 59 | 1 | 151 | 8 | 366 | 410 | MCI0362211.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 144 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 32690880 | 32690880 | PRJNA1068830_P_NODE_72580_length_253_cov_0.866667_g71877_i0 | PRJNA1068830 | 72580 | 253 | 0.866667 | 2.19266751 | Planctomycetales bacterium | 2053591 | Bacteria | Bacteria | 43.9 | 0.014 | NR | MBI5757453.1 | 2053591 | g71877 | i0 | 43 | 0.936758893280632 | 79 | 34 | 93.7 | 3 | 15 | 251 | 100 | 167 | MBI5757453.1 hypothetical protein [Planctomycetales bacterium] | diamond | 237 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;