RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1067370" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1067370 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28267191 28267191 PRJNA1067370_P_NODE_75326_length_257_cov_0.951087_g74777_i0 PRJNA1067370 75326 257 0.951087 2.44429359 Thermofilaceae archaeon 2268203 Archaea Archaea 86.3 1.59e-17   NR MEM2592699.1 2268203 g74777 i0 42.9 1.96108949416342 84 48 98.1 0 6 257 276 359 MEM2592699.1 DUF1116 domain-containing protein [Thermofilaceae archaeon] diamond 504 86.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae   Thermofilaceae archaeon
31267975 31267975 PRJNA1067370_P_NODE_80595_length_251_cov_0.865169_g80046_i0 PRJNA1067370 80595 251 0.865169 2.17157419 Thermoproteota archaeon 2056631 Archaea Archaea 85.9 1.29e-19   NR MDQ4072896.1 2056631 g80046 i0 63.2 0.681274900398406 57 21 68.1 0 173 3 20 76 MDQ4072896.1 hypothetical protein [Thermoproteota archaeon] diamond 171 85.9 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;