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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1067370" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1067370 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26592059 26592059 PRJNA1067370_P_NODE_100741_length_245_cov_0.895349_g100192_i0 PRJNA1067370 100741 245 0.895349 2.19360505 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62 2.29e-9   NR XP_067769195.1 135588 g100192 i0 43.5 0.844897959183673 69 36 80.8 1 48 245 4 72 XP_067769195.1 CAMK family protein kinase [Histomonas meleagridis] diamond 207 62 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27919935 27919935 PRJNA1067370_P_NODE_19065_length_429_cov_1.019663_g18517_i0 PRJNA1067370 19065 429 1.019663 4.37435427 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 50.1 2.98e-4   NR XP_001299866.1 412133 g18517 i0 42.9 0.391608391608392 56 31 39.2 1 425 258 58 112 XP_001299866.1 RNA polymerase II transcription regulator recruiting protein [Trichomonas vaginalis G3] diamond 168 50.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28077868 28077868 PRJNA1067370_P_NODE_71425_length_262_cov_2.037037_g70876_i0 PRJNA1067370 71425 262 2.037037 5.33703694 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 48.9 3.09e-4   NR XP_001302947.2 412133 g70876 i0 33 1.04198473282443 91 51 97.3 3 255 1 26 112 XP_001302947.2 stress-activated protein kinase signaling cascade [Trichomonas vaginalis G3] diamond 273 48.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28614686 28614686 PRJNA1067370_P_NODE_22927_length_397_cov_1.012346_g22379_i0 PRJNA1067370 22927 397 1.012346 4.01901362 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 64.3 1.24e-9   NR XP_067771139.1 135588 g22379 i0 48.1 0.612090680100756 81 35 61.2 3 3 245 103 176 XP_067771139.1 small GTP-binding protein [Histomonas meleagridis] diamond 243 64.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30288785 30288785 PRJNA1067370_P_NODE_60652_length_279_cov_1.121359_g60103_i0 PRJNA1067370 60652 279 1.121359 3.12859161 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 98.2 1.19e-23   NR XP_067774368.1 135588 g60103 i0 54.7 0.924731182795699 86 37 92.5 1 260 3 4 87 XP_067774368.1 uncharacterized protein GO595_005418 [Histomonas meleagridis] diamond 258 98.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31267979 31267979 PRJNA1067370_P_NODE_82275_length_250_cov_1.728814_g81726_i0 PRJNA1067370 82275 250 1.728814 4.322035 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 46.2 0.00118   NR XP_068364758.1 1144522 g81726 i0 50 1.008 42 21 50.4 0 1 126 51 92 XP_068364758.1 uncharacterized protein TRFO_03811 [Tritrichomonas foetus] diamond 252 46.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31679018 31679018 PRJNA1067370_P_NODE_93757_length_247_cov_0.885057_g93208_i0 PRJNA1067370 93757 247 0.885057 2.18609079 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 66.2 1.69e-10   NR XP_067769717.1 135588 g93208 i0 38.4 0.88663967611336 73 41 88.7 2 15 233 84 152 XP_067769717.1 CAMK family protein kinase [Histomonas meleagridis] diamond 219 66.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32398552 32398552 PRJNA1067370_P_NODE_87079_length_249_cov_0.875000_g86530_i0 PRJNA1067370 87079 249 0.875 2.17875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.7 0.008   NR XP_001296861.1 412133 g86530 i0 61.3 0.746987951807229 31 12 37.3 0 242 150 254 284 XP_001296861.1 STKc MAK like domain-containing protein [Trichomonas vaginalis G3] diamond 186 45.1 0.991130820399113 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32596511 32596511 PRJNA1067370_P_NODE_110020_length_242_cov_0.911243_g109471_i0 PRJNA1067370 110020 242 0.911243 2.20520806 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 66.2 1.93e-10   NR XP_067769010.1 135588 g109471 i0 51.6 1.38842975206612 64 30 79.3 1 3 194 293 355 XP_067769010.1 TKL family protein kinase [Histomonas meleagridis] diamond 336 66.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;