RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1067370" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9108541 9108541 PRJNA1067370_P_NODE_5848_length_732_cov_1.185129_g5349_i0 PRJNA1067370 5848 732 1.185129 8.67514428 Melioribacter 1134403 Bacteria Bacteria 311 1.9799999999999995e-101   NR MBS3944701.1 2052167 g5349 i0 74.1 14.0737704918033 205 53 84 0 116 730 7 211 MBS3944701.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Melioribacter sp.] diamond 10302 313 0.993610223642173 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Melioribacter Melioribacter sp.
16757627 16757627 PRJNA1067370_P_NODE_21414_length_408_cov_1.200000_g20866_i0 PRJNA1067370 21414 408 1.2 4.896 Bacteria 2 Bacteria Bacteria 236 3.8e-72   NR MCB0725576.1 2026749 g20866 i0 80 20.8823529411765 135 26 99.3 1 406 2 149 282 MCB0725576.1 phosphoenolpyruvate carboxykinase (GTP) [Ignavibacteriota bacterium] diamond 8520 236 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
27572679 27572679 PRJNA1067370_P_NODE_16384_length_459_cov_1.000000_g15836_i0 PRJNA1067370 16384 459 1 4.59 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 50.1 3.62e-4   NR MBK7631751.1 2049428 g15836 i0 30.4 1.43790849673203 102 66 65.4 2 431 132 76 174 MBK7631751.1 GrpB family protein [Ignavibacteriales bacterium] diamond 660 50.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28204043 28204043 PRJNA1067370_P_NODE_71866_length_262_cov_1.153439_g71317_i0 PRJNA1067370 71866 262 1.153439 3.02201018 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 128 3.5800000000000004e-33   NR RPI17999.1 2026749 g71317 i0 68.6 1.96946564885496 86 27 98.5 0 1 258 122 207 RPI17999.1 MAG: kynureninase [Ignavibacteriota bacterium] diamond 516 128 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29742759 29742759 PRJNA1067370_P_NODE_114150_length_241_cov_0.916667_g113601_i0 PRJNA1067370 114150 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 78.6 8.8e-15   NR OIP63676.1 1805221 g113601 i0 50.6 4.92946058091286 79 38 98.3 1 1 237 301 378 OIP63676.1 MAG: hypothetical protein AUK34_01090 [Ignavibacteria bacterium CG2_30_36_16] diamond 1188 78.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium CG2_30_36_16
31742153 31742153 PRJNA1067370_P_NODE_100337_length_245_cov_0.895349_g99788_i0 PRJNA1067370 100337 245 0.895349 2.19360505 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 73.2 1.35e-13   NR HMN49018.1 2651163 g99788 i0 47 0.808163265306122 66 34 80.8 1 9 206 146 210 HMN49018.1 SGNH/GDSL hydrolase family protein [Ignavibacteriaceae bacterium] diamond 198 73.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31742226 31742226 PRJNA1067370_P_NODE_47457_length_303_cov_0.830435_g46909_i0 PRJNA1067370 47457 303 0.830435 2.51621805 Ignavibacteria bacterium 2053306 Bacteria Bacteria 61.2 2.87e-9   NR HLT24110.1 2053306 g46909 i0 36.1 1.87128712871287 83 50 79.2 2 288 49 9 91 HLT24110.1 SRPBCC domain-containing protein [Ignavibacteria bacterium] diamond 567 61.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32753841 32753841 PRJNA1067370_P_NODE_19300_length_426_cov_2.334278_g18752_i0 PRJNA1067370 19300 426 2.334278 9.94402428 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 57.4 1.92e-6   NR MCX7876842.1 2614255 g18752 i0 59.1 0.309859154929577 44 18 31 0 5 136 369 412 MCX7876842.1 sel1 repeat family protein [Melioribacteraceae bacterium] diamond 132 57.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;