RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1067370" and tax_phylum = "Entoprocta"

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tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22690053 22690053 PRJNA1067370_P_NODE_40658_length_317_cov_1.573770_g40110_i0 PRJNA1067370 40658 317 1.57377 4.9888509 Metazoa 33208 Entoprocta other_Eukaryota 177 1.26e-53   NR ABW93480.1 478378 g40110 i0 78.6 14.6593059936909 103 22 97.5 0 309 1 59 161 ABW93480.1 putative ribosomal protein SA, partial [Barentsia elongata] diamond 4647 177 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;