RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1067370" and tax_phylum = "Candidatus Omnitrophota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1067370 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11659499 11659499 PRJNA1067370_P_NODE_4490_length_827_cov_2.503979_g4014_i0 PRJNA1067370 4490 827 2.503979 20.70790633 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 311 9.28e-102   NR HAJ56580.1 2035772 g4014 i0 59.2 1.93712212817412 267 109 96.9 0 803 3 2 268 HAJ56580.1 erythromycin biosynthesis sensory transduction protein eryC1 [Candidatus Omnitrophota bacterium] diamond 1602 311 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27067080 27067080 PRJNA1067370_P_NODE_16262_length_460_cov_1.705426_g15714_i0 PRJNA1067370 16262 460 1.705426 7.8449596 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 3.29e-8   NR MDD5422892.1 2035772 g15714 i0 47.6 2.21739130434783 82 32 53.5 1 375 130 42 112 MDD5422892.1 molecular chaperone DnaJ [Candidatus Omnitrophota bacterium] diamond 1020 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27320099 27320099 PRJNA1067370_P_NODE_105543_length_243_cov_2.717647_g104994_i0 PRJNA1067370 105543 243 2.717647 6.60388221 Candidatus Saelkia tenebricola 3041141 Bacteria Bacteria 127 6.05e-33   NR MDP8233357.1 3041141 g104994 i0 80 1.97530864197531 80 16 98.8 0 242 3 36 115 MDP8233357.1 phosphopyruvate hydratase [Candidatus Saelkia tenebricola] diamond 480 127 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Saelkia Candidatus Saelkia tenebricola
29941044 29941044 PRJNA1067370_P_NODE_79351_length_251_cov_1.174157_g78802_i0 PRJNA1067370 79351 251 1.174157 2.94713407 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 60.1 2.18e-8   NR MEK6714813.1 2035772 g78802 i0 62.9 2.52191235059761 35 13 41.8 0 145 249 126 160 MEK6714813.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 633 60.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30248685 30248685 PRJNA1067370_P_NODE_59532_length_280_cov_2.434783_g58983_i0 PRJNA1067370 59532 280 2.434783 6.8173924 Pseudomonadati 3379134 Bacteria Bacteria 142 1.7099999999999996e-40   NR NPU97984.1 2035772 g58983 i0 70.5 16.0714285714286 88 26 94.3 0 16 279 4 91 NPU97984.1 DJ-1/PfpI family protein [Candidatus Omnitrophota bacterium] diamond 4500 142 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30383623 30383623 PRJNA1067370_P_NODE_74093_length_258_cov_2.464865_g73544_i0 PRJNA1067370 74093 258 2.464865 6.3593517 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.0326   NR MBN1869024.1 2035772 g73544 i0 33 1.05813953488372 91 42 83.7 1 37 252 324 414 MBN1869024.1 tetratricopeptide repeat protein [Candidatus Omnitrophota bacterium] diamond 273 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32058597 32058597 PRJNA1067370_P_NODE_100438_length_245_cov_0.895349_g99889_i0 PRJNA1067370 100438 245 0.895349 2.19360505 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62 6.19e-9   NR MEW5895050.1 2035772 g99889 i0 44.3 2.57142857142857 70 35 80.8 1 9 206 469 538 MEW5895050.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 630 62 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32090347 32090347 PRJNA1067370_P_NODE_31558_length_349_cov_1.086957_g31010_i0 PRJNA1067370 31558 349 1.086957 3.79347993 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 83.2 8.17e-16   NR MEI6438038.1 2035772 g31010 i0 55.9 2.39828080229226 68 30 58.5 0 339 136 227 294 MEI6438038.1 mucoidy inhibitor MuiA family protein [Candidatus Omnitrophota bacterium] diamond 837 83.2 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32406818 32406818 PRJNA1067370_P_NODE_38299_length_324_cov_1.876494_g37751_i0 PRJNA1067370 38299 324 1.876494 6.07984056 Candidatus Omnitrophica bacterium CG 2035772 Bacteria Bacteria 112 1.39e-26   NR PIU41869.1 1974741 g37751 i0 55.3 4.85185185185185 103 37 95.4 2 16 324 77 170 PIU41869.1 MAG: homospermidine synthase [Candidatus Omnitrophica bacterium CG07_land_8_20_14_0_80_42_15] diamond 1572 112 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Aquitaenariimonas Candidatus Aquitaenariimonas noxiae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;