contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA1066877" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27446618 | 27446618 | PRJNA1066877_S_NODE_7423_length_198_cov_0.899329_g7388_i0 | PRJNA1066877 | 7423 | 198 | 0.899329 | 1.78067142 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 139 | 3.65e-38 | NR | WP_304161486.1 | 1528099 | g7388 | i0 | 100 | 0.984848484848485 | 65 | 0 | 98.5 | 0 | 3 | 197 | 32 | 96 | WP_304161486.1 zinc-binding dehydrogenase [Lawsonella clevelandensis] | diamond | 195 | 139 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 30161697 | 30161697 | PRJNA1066877_S_NODE_5492_length_220_cov_1.187135_g5457_i0 | PRJNA1066877 | 5492 | 220 | 1.187135 | 2.611697 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 59.3 | 2.58e-8 | NR | WP_394268123.1 | 1528099 | g5457 | i0 | 100 | 0.354545454545455 | 26 | 0 | 35.5 | 0 | 78 | 1 | 1 | 26 | WP_394268123.1 PspA/IM30 family protein [Lawsonella clevelandensis] | diamond | 78 | 59.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 31868681 | 31868681 | PRJNA1066877_S_NODE_6757_length_204_cov_1.316129_g6722_i0 | PRJNA1066877 | 6757 | 204 | 1.316129 | 2.68490316 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 135 | 3.05e-35 | NR | WP_304136041.1 | 1528099 | g6722 | i0 | 100 | 0.985294117647059 | 67 | 0 | 98.5 | 0 | 203 | 3 | 262 | 328 | WP_304136041.1 hypothetical protein [Lawsonella clevelandensis] | diamond | 201 | 135 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 32153606 | 32153606 | PRJNA1066877_S_NODE_5078_length_227_cov_1.061798_g5043_i0 | PRJNA1066877 | 5078 | 227 | 1.061798 | 2.41028146 | Amycolatopsis dongchuanensis | 1070866 | Bacteria | Bacteria | 43.1 | 0.0216 | NR | WP_346056675.1 | 1070866 | g5043 | i0 | 36.7 | 0.79295154185022 | 60 | 33 | 72.7 | 2 | 35 | 199 | 99 | 158 | WP_346056675.1 sensor histidine kinase [Amycolatopsis dongchuanensis] | diamond | 180 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Amycolatopsis | Amycolatopsis dongchuanensis | ||
| 32280351 | 32280351 | PRJNA1066877_S_NODE_10919_length_170_cov_0.867769_g10884_i0 | PRJNA1066877 | 10919 | 170 | 0.867769 | 1.4752073 | Corynebacterium sp. KPL4 | 1720 | Bacteria | Bacteria | 115 | 4.75e-29 | NR | WP_340440546.1 | 3135440 | g10884 | i0 | 100 | 0.988235294117647 | 56 | 0 | 98.8 | 0 | 1 | 168 | 108 | 163 | WP_340440546.1 glycoside hydrolase family 26 protein [Corynebacterium sp. KPL4072] | diamond | 168 | 115 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. KPL4072 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;