RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9107295 9107295 PRJNA1063685_S_NODE_48628_length_325_cov_3.198413_g48085_i0 PRJNA1063685 48628 325 3.198413 10.39484225 Ustilaginoidea virens partitivirus 14 2971976 Viruses Viruses 163 6.599999999999999e-46   NR UVX28931.1 2971976 g48085 i0 82.3 1.82769230769231 96 17 88.6 0 34 321 96 191 UVX28931.1 MAG: RNA dependent RNA polymerase [Ustilaginoidea virens partitivirus 14] diamond 594 163 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Ustilaginoidea virens partitivirus 14
29592964 29592964 PRJNA1063685_S_NODE_42430_length_355_cov_7.971631_g41887_i0 PRJNA1063685 42430 355 7.971631 28.29929005 Trichoderma gamsii alphapartitivirus 1 3032463 Viruses Viruses 209 5.26e-62   NR WGH72964.1 3032463 g41887 i0 86.4 0.929577464788732 110 15 93 0 18 347 70 179 WGH72964.1 MAG: putative RNA-dependent RNA polymerase [Trichoderma gamsii alphapartitivirus 1] diamond 330 209 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Trichoderma gamsii alphapartitivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;