RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28227166 28227166 PRJNA1063685_S_NODE_11366_length_609_cov_1.766791_g10851_i0 PRJNA1063685 11366 609 1.766791 10.75975719 Pseudomonadati 3379134 Bacteria Bacteria 233 5.03e-71   NR OGV44315.1 1798573 g10851 i0 56.2 21.0049261083744 203 86 100 2 609 1 15 214 OGV44315.1 MAG: UDP-glucose 6-dehydrogenase [Lentisphaerae bacterium GWF2_49_21] diamond 12792 234 0.995726495726496 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium GWF2_49_21
29814273 29814273 PRJNA1063685_S_NODE_14071_length_573_cov_2.274000_g13548_i0 PRJNA1063685 14071 573 2.274 13.03002 Lentisphaerota bacterium 1932692 Bacteria Bacteria 64.7 1.92e-8   NR MCP3965836.1 1932692 g13548 i0 32.5 0.612565445026178 117 75 59.2 1 569 231 214 330 MCP3965836.1 winged helix-turn-helix domain-containing protein [Lentisphaerota bacterium] diamond 351 64.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;