RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1063685 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27193400 27193400 PRJNA1063685_S_NODE_26802_length_452_cov_8.263852_g26261_i0 PRJNA1063685 26802 452 8.263852 37.35261104 Fidelibacterota bacterium 2026760 Bacteria Bacteria 104 5.54e-24   NR MCJ7802071.1 2026760 g26261 i0 50.5 0.643805309734513 97 46 63.1 2 31 315 173 269 MCJ7802071.1 lipase family protein [Fidelibacterota bacterium] diamond 291 104 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32090263 32090263 PRJNA1063685_S_NODE_26938_length_451_cov_9.060847_g26397_i0 PRJNA1063685 26938 451 9.060847 40.86441997 Fidelibacterota bacterium 2026760 Bacteria Bacteria 112 5.62e-26   NR HIN03293.1 2026760 g26397 i0 40.9 8.90022172949002 132 72 87.8 1 19 414 287 412 HIN03293.1 peptidase M28 family protein [Fidelibacterota bacterium] diamond 4014 112 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;