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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA1063685 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
179614 179614 PRJNA1063685_S_NODE_3641_length_783_cov_27.195775_g3240_i0 PRJNA1063685 3641 783 27.195775 212.94291825 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 374 6.77e-126   NR CEP00240.1 37360 g3240 i0 76.7 6.95785440613027 227 53 87 0 782 102 188 414 CEP00240.1 hypothetical protein PBRA_007974 [Plasmodiophora brassicae] diamond 5448 374 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
11658026 11658026 PRJNA1063685_S_NODE_2490_length_853_cov_54.717949_g2131_i0 PRJNA1063685 2490 853 54.717949 466.74410497 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 141 2.6e-34   NR CEO98408.1 37360 g2131 i0 35.6 6.72450175849941 247 147 84.4 8 73 792 270 511 CEO98408.1 hypothetical protein PBRA_006522 [Plasmodiophora brassicae] diamond 5736 141 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
26877545 26877545 PRJNA1063685_S_NODE_4941_length_734_cov_17.201210_g4509_i0 PRJNA1063685 4941 734 17.20121 126.2568814 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 223 4.07e-69   NR CEP02680.1 37360 g4509 i0 48.9 0.895095367847411 219 109 89.1 2 38 691 49 265 CEP02680.1 hypothetical protein PBRA_002647 [Plasmodiophora brassicae] diamond 657 223 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
27627699 27627699 PRJNA1063685_S_NODE_52164_length_310_cov_1.126582_g51621_i0 PRJNA1063685 52164 310 1.126582 3.4924042 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 85.9 5.08e-17   NR CEO96281.1 37360 g51621 i0 51.1 7.71290322580645 88 40 85.2 1 309 46 39 123 CEO96281.1 hypothetical protein PBRA_004952 [Plasmodiophora brassicae] diamond 2391 86.7 0.990772779700115 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28069548 28069548 PRJNA1063685_S_NODE_12585_length_592_cov_3.726397_g12068_i0 PRJNA1063685 12585 592 3.726397 22.06027024 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 162 4.25e-44   NR CEP02402.1 37360 g12068 i0 44.4 3.48141891891892 180 98 90.7 2 585 49 214 392 CEP02402.1 hypothetical protein PBRA_008986 [Plasmodiophora brassicae] diamond 2061 162 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28393520 28393520 PRJNA1063685_S_NODE_8406_length_655_cov_10.367698_g7902_i0 PRJNA1063685 8406 655 10.367698 67.9084219 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 182 5.93e-53   NR CEO95967.1 37360 g7902 i0 42.6 3.06412213740458 230 118 99.4 4 653 3 70 298 CEO95967.1 hypothetical protein PBRA_004657 [Plasmodiophora brassicae] diamond 2007 182 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28480064 28480064 PRJNA1063685_S_NODE_4986_length_733_cov_7.774242_g4553_i0 PRJNA1063685 4986 733 7.774242 56.98519386 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 170 1.57e-48   NR CEO98354.1 37360 g4553 i0 42.2 3.84720327421555 232 131 93.7 2 733 47 18 249 CEO98354.1 hypothetical protein PBRA_006468 [Plasmodiophora brassicae] diamond 2820 170 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29395683 29395683 PRJNA1063685_S_NODE_729_length_1235_cov_5.934596_g185_i1 PRJNA1063685 729 1235 5.934596 73.2922606 root 1 Root_unresolved Root_unresolved 99 7.23e-20   NR YP_009350047.1 70186 g185 i1 31.1 2.29797570850202 228 130 54.4 6 8 679 24 228 YP_009350047.1 30S ribosomal protein S12/S7 [Spongospora subterranea] diamond 2838 99 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Spongospora Spongospora subterranea
30067047 30067047 PRJNA1063685_S_NODE_48892_length_324_cov_2.458167_g48349_i0 PRJNA1063685 48892 324 2.458167 7.96446108 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 85.1 1.25e-16   NR CEP02772.1 37360 g48349 i0 46 0.925925925925926 100 47 92.6 3 2 301 484 576 CEP02772.1 hypothetical protein PBRA_002739 [Plasmodiophora brassicae] diamond 300 85.1 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30635614 30635614 PRJNA1063685_S_NODE_10533_length_620_cov_27.687386_g10018_i0 PRJNA1063685 10533 620 27.687386 171.6617932 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 94.4 1.81e-18   NR CEP03425.1 37360 g10018 i0 37.2 0.924193548387097 191 92 82.3 7 616 107 336 519 CEP03425.1 hypothetical protein PBRA_003185 [Plasmodiophora brassicae] diamond 573 94.4 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31331002 31331002 PRJNA1063685_S_NODE_9136_length_642_cov_13.043937_g8627_i0 PRJNA1063685 9136 642 13.043937 83.74207554 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 62.8 1.71e-7   NR SPQ95750.1 37360 g8627 i0 34.5 0.52803738317757 113 62 51.4 3 607 278 65 168 SPQ95750.1 unnamed protein product [Plasmodiophora brassicae] diamond 339 62.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32271973 32271973 PRJNA1063685_S_NODE_63898_length_267_cov_3.556701_g63355_i0 PRJNA1063685 63898 267 3.556701 9.49639167 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.9 9.67e-8   NR CEO96211.1 37360 g63355 i0 37.2 6.25842696629214 86 52 95.5 2 259 5 379 463 CEO96211.1 hypothetical protein PBRA_004882 [Plasmodiophora brassicae] diamond 1671 59.3 0.993254637436762 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32596464 32596464 PRJNA1063685_S_NODE_33080_length_408_cov_2.940299_g32538_i0 PRJNA1063685 33080 408 2.940299 11.99641992 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 72.4 6.71e-12   NR CEP02746.1 37360 g32538 i0 50.5 0.713235294117647 97 37 63.2 2 403 146 160 256 CEP02746.1 hypothetical protein PBRA_002713 [Plasmodiophora brassicae] diamond 291 72.4 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32596482 32596482 PRJNA1063685_S_NODE_74400_length_241_cov_1.559524_g73857_i0 PRJNA1063685 74400 241 1.559524 3.75845284 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.45e-18   NR SPQ97871.1 37360 g73857 i0 56.4 1.91701244813278 78 34 97.1 0 234 1 760 837 SPQ97871.1 unnamed protein product [Plasmodiophora brassicae] diamond 462 89.4 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;