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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 22 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1063685 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18863683 18863683 PRJNA1063685_S_NODE_65075_length_264_cov_1.219895_g64532_i0 PRJNA1063685 65075 264 1.219895 3.2205228 Micavibrio 213485 Bacteria Bacteria 160 6.58e-44   NR PZQ48645.1 349221 g64532 i0 87.4 2.96590909090909 87 11 98.9 0 3 263 403 489 PZQ48645.1 MAG: threonine--tRNA ligase [Micavibrio aeruginosavorus] diamond 783 160 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
23964485 23964485 PRJNA1063685_S_NODE_54319_length_301_cov_0.916667_g53776_i0 PRJNA1063685 54319 301 0.916667 2.75916767 Micavibrio sp. 2024841 Bacteria Bacteria 154 1.3799999999999999e-43   NR HEU4839683.1 2024841 g53776 i0 73.7 4.93355481727575 99 26 98.7 0 299 3 125 223 HEU4839683.1 anthranilate phosphoribosyltransferase [Micavibrio sp.] diamond 1485 154 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
26750196 26750196 PRJNA1063685_S_NODE_35741_length_392_cov_1.175549_g35198_i0 PRJNA1063685 35741 392 1.175549 4.60815208 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 171 1.3e-48   NR PZO88774.1 349221 g35198 i0 70.8 0.994897959183674 130 38 99.5 0 2 391 194 323 PZO88774.1 MAG: MATE family efflux transporter [Micavibrio aeruginosavorus] diamond 390 171 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
26972104 26972104 PRJNA1063685_S_NODE_1622_length_965_cov_11.110987_g1327_i0 PRJNA1063685 1622 965 11.110987 107.22102455 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 173 2.04e-50   NR MBX9702949.1 2654442 g1327 i0 70.7 0.382383419689119 123 35 38.2 1 538 170 1 122 MBX9702949.1 hypothetical protein [Silvanigrellaceae bacterium] diamond 369 173 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
27383274 27383274 PRJNA1063685_S_NODE_18163_length_528_cov_2.026374_g17627_i0 PRJNA1063685 18163 528 2.026374 10.69925472 Bacteriovorax antarcticus 3088717 Bacteria Bacteria 160 5.02e-42   NR WP_323577870.1 3088717 g17627 i0 54 0.914772727272727 161 66 91.5 3 487 5 1020 1172 WP_323577870.1 serine hydrolase [Bacteriovorax antarcticus] diamond 483 160 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax antarcticus
27415069 27415069 PRJNA1063685_S_NODE_9183_length_642_cov_2.300527_g8674_i0 PRJNA1063685 9183 642 2.300527 14.76938334 Oligoflexaceae bacterium 2957744 Bacteria Bacteria 46.6 0.0167   NR MDA9950979.1 2957744 g8674 i0 46.3 0.191588785046729 41 22 19.2 0 629 507 134 174 MDA9950979.1 response regulator [Oligoflexaceae bacterium] diamond 123 46.6 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae   Oligoflexaceae bacterium
27541172 27541172 PRJNA1063685_S_NODE_37224_length_383_cov_4.877419_g36681_i0 PRJNA1063685 37224 383 4.877419 18.68051477 Micavibrio sp. 2024841 Bacteria Bacteria 67 3.99e-11   NR MFA5592324.1 2024841 g36681 i0 54.5 0.830287206266319 66 22 51.7 1 199 2 64 121 MFA5592324.1 peptidoglycan-binding domain-containing protein [Micavibrio sp.] diamond 318 67 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
28583169 28583169 PRJNA1063685_S_NODE_65427_length_263_cov_1.342105_g64884_i0 PRJNA1063685 65427 263 1.342105 3.52973615 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 124 1.46e-33   NR WP_409479636.1 3386277 g64884 i0 63.3 2.90874524714829 90 24 92.4 1 258 16 110 199 WP_409479636.1 5-formyltetrahydrofolate cyclo-ligase [Pseudobdellovibrio sp. HCB154] diamond 765 124 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
29561661 29561661 PRJNA1063685_S_NODE_65990_length_261_cov_2.457447_g65447_i0 PRJNA1063685 65990 261 2.457447 6.41393667 Oligoflexia bacterium 2599941 Bacteria Bacteria 47.4 0.00106   NR MYE07237.1 2599941 g65447 i0 35.4 1.81609195402299 79 51 90.8 0 15 251 379 457 MYE07237.1 translation initiation factor IF-2 [Oligoflexia bacterium] diamond 474 47.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
29624435 29624435 PRJNA1063685_S_NODE_13810_length_576_cov_6.970179_g13287_i0 PRJNA1063685 13810 576 6.970179 40.14823104 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 335 4.839999999999999e-115   NR MBX9767865.1 2053517 g13287 i0 92.7 0.921875 177 13 92.2 0 574 44 25 201 MBX9767865.1 hypothetical protein [Bdellovibrionales bacterium] diamond 531 335 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30129923 30129923 PRJNA1063685_S_NODE_10392_length_622_cov_37.686703_g9877_i0 PRJNA1063685 10392 622 37.686703 234.41129266 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 179 2.08e-51   NR MCB0392966.1 2053517 g9877 i0 46.2 1.87138263665595 195 100 92.6 3 621 46 136 328 MCB0392966.1 adenosine deaminase [Bdellovibrionales bacterium] diamond 1164 179 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30216723 30216723 PRJNA1063685_S_NODE_11592_length_605_cov_9.866541_g11077_i0 PRJNA1063685 11592 605 9.866541 59.69257305 root 1 Root_unresolved Root_unresolved 132 2.33e-33   NR PIT99634.1 1973927 g11077 i0 46.7 1.51735537190083 152 79 74.4 2 11 460 180 331 PIT99634.1 MAG: zinc-binding alcohol dehydrogenase family protein [Bdellovibrionales bacterium CG10_big_fil_rev_8_21_14_0_10_45_34] diamond 918 132 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium CG10_big_fil_rev_8_21_14_0_10_45_34
30477960 30477960 PRJNA1063685_S_NODE_29233_length_434_cov_9.105263_g28691_i0 PRJNA1063685 29233 434 9.105263 39.51684142 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 141 1.1e-35   NR PZQ47054.1 349221 g28691 i0 68.4 0.67741935483871 98 30 67.1 1 419 129 24 121 PZQ47054.1 MAG: hypothetical protein DI551_04030 [Micavibrio aeruginosavorus] diamond 294 141 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30635628 30635628 PRJNA1063685_S_NODE_26673_length_453_cov_8.321053_g26132_i0 PRJNA1063685 26673 453 8.321053 37.69437009 Micavibrio sp. 2024841 Bacteria Bacteria 84.3 1.12e-15   NR MAE51158.1 2024841 g26132 i0 69.5 0.390728476821192 59 18 39.1 0 274 450 51 109 MAE51158.1 GGDEF-domain containing protein [Micavibrio sp.] diamond 177 84.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
30762281 30762281 PRJNA1063685_S_NODE_43534_length_350_cov_1.429603_g42991_i0 PRJNA1063685 43534 350 1.429603 5.0036105 Bacteriovorax antarcticus 3088717 Bacteria Bacteria 143 1.37e-39   NR WP_323574050.1 3088717 g42991 i0 91 0.668571428571429 78 7 66.9 0 349 116 197 274 WP_323574050.1 Flp pilus assembly protein CpaB [Bacteriovorax antarcticus] diamond 234 143 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax antarcticus
30762293 30762293 PRJNA1063685_S_NODE_73234_length_243_cov_3.282353_g72691_i0 PRJNA1063685 73234 243 3.282353 7.97611779 Micavibrio sp. 2024841 Bacteria Bacteria 117 5.13e-31   NR MAE51170.1 2024841 g72691 i0 81.5 0.802469135802469 65 12 80.2 0 47 241 1 65 MAE51170.1 ribosomal subunit interface protein [Micavibrio sp.] diamond 195 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
30888614 30888614 PRJNA1063685_S_NODE_38594_length_376_cov_1.504950_g38051_i0 PRJNA1063685 38594 376 1.50495 5.658612 Oligoflexia bacterium 2599941 Bacteria Bacteria 115 2.73e-28   NR MDZ4676061.1 2599941 g38051 i0 50 0.909574468085106 114 56 90.2 1 339 1 45 158 MDZ4676061.1 adenosine deaminase [Oligoflexia bacterium] diamond 342 115 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
30983552 30983552 PRJNA1063685_S_NODE_51994_length_310_cov_5.000000_g51451_i0 PRJNA1063685 51994 310 5 15.5 Micavibrio sp. 2024841 Bacteria Bacteria 138 1.85e-35   NR MAE51199.1 2024841 g51451 i0 64 0.967741935483871 100 35 96.8 1 3 302 776 874 MAE51199.1 hypothetical protein [Micavibrio sp.] diamond 300 138 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
31236054 31236054 PRJNA1063685_S_NODE_61035_length_276_cov_3.586207_g60492_i0 PRJNA1063685 61035 276 3.586207 9.89793132 Micavibrio sp. 2024841 Bacteria Bacteria 133 5.97e-38   NR MAE52192.1 2024841 g60492 i0 84.9 0.793478260869565 73 11 79.3 0 220 2 1 73 MAE52192.1 two-component system response regulator [Micavibrio sp.] diamond 219 133 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
31362848 31362848 PRJNA1063685_S_NODE_3596_length_785_cov_13.494382_g3195_i0 PRJNA1063685 3596 785 13.494382 105.9308987 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 116 7.030000000000001e-26   NR MBS1971917.1 2053517 g3195 i0 36.3 1.60127388535032 245 132 87.1 12 10 693 118 355 MBS1971917.1 trypsin-like peptidase domain-containing protein [Bdellovibrionales bacterium] diamond 1257 116 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31765552 31765552 PRJNA1063685_S_NODE_52997_length_306_cov_2.042918_g52454_i0 PRJNA1063685 52997 306 2.042918 6.25132908 Bdellovibrionota 3018035 Bacteria Bacteria 55.1 2.2e-6   NR NRA63819.1 2020859 g52454 i0 34 5.86274509803922 94 59 90.2 2 26 301 90 182 NRA63819.1 hypothetical protein [Pseudobacteriovorax sp.] diamond 1794 55.5 0.992792792792793 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Pseudobacteriovoracaceae Pseudobacteriovorax Pseudobacteriovorax sp.
32722339 32722339 PRJNA1063685_S_NODE_10980_length_614_cov_5.188540_g10465_i0 PRJNA1063685 10980 614 5.18854 31.8576356 Pigmentibacter ruber 2683196 Bacteria Bacteria 90.5 7.11e-20   NR WP_158998151.1 2683196 g10465 i0 52.4 1.62214983713355 84 40 41 0 524 273 2 85 WP_158998151.1 30S ribosomal protein S15 [Pigmentibacter ruber] diamond 996 90.5 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae Pigmentibacter Pigmentibacter ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;