RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1063685" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1063685 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
179631 179631 PRJNA1063685_S_NODE_3821_length_775_cov_19.343305_g3414_i0 PRJNA1063685 3821 775 19.343305 149.91061375 Nanobdellati 1783276 Archaea Archaea 350 2.79e-116   NR MBU0667468.1 2026764 g3414 i0 71.8 22.2154838709677 238 67 92.1 0 10 723 195 432 MBU0667468.1 phosphopyruvate hydratase [Nanoarchaeota archaeon] diamond 17217 350 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
19305343 19305343 PRJNA1063685_S_NODE_4196_length_759_cov_6.760933_g3781_i0 PRJNA1063685 4196 759 6.760933 51.31548147 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 293 3.3599999999999996e-94   NR NYZ73931.1 2250274 g3781 i0 60.7 8.81422924901186 242 82 95.7 3 33 758 182 410 NYZ73931.1 ATPase [Candidatus Micrarchaeota archaeon] diamond 6690 293 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
26710357 26710357 PRJNA1063685_S_NODE_73961_length_242_cov_1.272189_g73418_i0 PRJNA1063685 73961 242 1.272189 3.07869738 root 1 Root_unresolved Root_unresolved 110 2.21e-26   NR MFH0884207.1 2250274 g73418 i0 65 4.95867768595041 80 26 99.2 1 241 2 220 297 MFH0884207.1 ATP citrate lyase citrate-binding domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 1200 110 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
28867127 28867127 PRJNA1063685_S_NODE_5448_length_720_cov_7.126739_g4997_i0 PRJNA1063685 5448 720 7.126739 51.3125208 Nanobdellota archaeon 2026764 Archaea Archaea 46.2 0.0409   NR MEK6859137.1 2026764 g4997 i0 34.7 0.3125 75 44 29.2 2 681 472 14 88 MEK6859137.1 Era-like GTP-binding protein [Nanoarchaeota archaeon] diamond 225 46.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28930381 28930381 PRJNA1063685_S_NODE_49628_length_321_cov_1.350806_g49085_i0 PRJNA1063685 49628 321 1.350806 4.33608726 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 64.3 1.7e-10   NR MBN2459833.1 2026803 g49085 i0 42.1 0.710280373831776 76 41 71 3 228 1 27 99 MBN2459833.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 228 64.3 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
30446428 30446428 PRJNA1063685_S_NODE_37853_length_380_cov_1.456026_g37310_i0 PRJNA1063685 37853 380 1.456026 5.5328988 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 63.5 8.5e-9   NR HOL90495.1 2026773 g37310 i0 38.2 3.25263157894737 102 50 79.7 3 1 303 335 424 HOL90495.1 phospholipid carrier-dependent glycosyltransferase [Candidatus Pacearchaeota archaeon] diamond 1236 63.5 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
32816706 32816706 PRJNA1063685_S_NODE_12400_length_594_cov_8.829175_g11883_i0 PRJNA1063685 12400 594 8.829175 52.4452995 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 223 2.8199999999999998e-67   NR MDP6845833.1 2910166 g11883 i0 69.3 1.64646464646465 163 50 82.3 0 6 494 307 469 MDP6845833.1 IMP dehydrogenase [Candidatus Nanoarchaeia archaeon] diamond 978 223 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;