RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1061474" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26995306 26995306 PRJNA1061474_P_NODE_58222_length_235_cov_2.376543_g57976_i0 PRJNA1061474 58222 235 2.376543 5.58487605 Eukaryota 2759 Fungi Fungi 68.2 6.73e-12   NR KAJ1678448.1 68401 g57976 i0 55.2 6.17872340425532 58 25 72.8 1 194 24 15 72 KAJ1678448.1 eukaryotic translation initiation factor 5, partial [Spiromyces aspiralis] diamond 1452 68.6 0.994169096209913 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
27098669 27098669 PRJNA1061474_P_NODE_56502_length_242_cov_0.911243_g56256_i0 PRJNA1061474 56502 242 0.911243 2.20520806 Entomophthora muscae 34485 Fungi Fungi 62.8 1.43e-9   NR KAJ9066008.1 34485 g56256 i0 57.4 3.07438016528926 47 20 58.3 0 237 97 163 209 KAJ9066008.1 Riboflavin synthase alpha chain [Entomophthora muscae] diamond 744 62.8 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;