RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1061474" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1061474 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26940409 26940409 PRJNA1061474_P_NODE_48962_length_248_cov_0.880000_g48716_i0 PRJNA1061474 48962 248 0.88 2.1824 Picornaviridae sp. 1530251 Viruses Viruses 161 9.06e-44   NR XDJ26655.1 1530251 g48716 i0 90.2 0.991935483870968 82 8 99.2 0 2 247 1512 1593 XDJ26655.1 polyprotein [Picornaviridae sp.] diamond 246 161 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.
30951945 30951945 PRJNA1061474_P_NODE_4474_length_1040_cov_1.661841_g4308_i0 PRJNA1061474 4474 1040 1.661841 17.2831464 Pineapple secovirus C 3022851 Viruses Viruses 570 5.82e-193   NR WCR39296.1 3022851 g4308 i0 77.7 0.998076923076923 346 76 99.8 1 1039 2 711 1055 WCR39296.1 polyprotein 2 [Pineapple secovirus C] diamond 1038 570 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Pineapple secovirus C

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;