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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA1061474" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA1061474 · 14 ✖

analysis 1

  • diamond · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2729353 2729353 PRJNA1061474_P_NODE_48063_length_249_cov_0.875000_g47817_i0 PRJNA1061474 48063 249 0.875 2.17875 Methanomicrobiales archaeon 2184052 Archaea Archaea 144 4.56e-39   NR HMA05958.1 2184052 g47817 i0 86.6 0.987951807228916 82 11 98.8 0 2 247 51 132 HMA05958.1 phosphomethylpyrimidine synthase ThiC [Methanomicrobiales archaeon] diamond 246 144 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales     Methanomicrobiales archaeon
4005523 4005523 PRJNA1061474_P_NODE_56324_length_242_cov_0.911243_g56078_i0 PRJNA1061474 56324 242 0.911243 2.20520806 Candidatus Lutacidiplasmatales archaeon 3345206 Archaea Archaea 109 2.79e-26   NR MFI5413169.1 3345206 g56078 i0 68.8 1.98347107438017 80 25 99.2 0 240 1 313 392 MFI5413169.1 trans-sulfuration enzyme family protein [Candidatus Lutacidiplasmatales archaeon] diamond 480 109 1 Archaea   Methanobacteriati Thermoplasmatota   Candidatus Lutacidiplasmatales     Candidatus Lutacidiplasmatales archaeon
28322090 28322090 PRJNA1061474_P_NODE_48166_length_249_cov_0.875000_g47920_i0 PRJNA1061474 48166 249 0.875 2.17875 Archaea 2157 Archaea Archaea 122 1.42e-30   NR MCJ7464242.1 1906666 g47920 i0 74.4 1.97590361445783 82 21 98.8 0 247 2 298 379 MCJ7464242.1 hypothetical protein [Thermoplasmata archaeon] diamond 492 123 0.991869918699187 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28677828 28677828 PRJNA1061474_P_NODE_53727_length_244_cov_0.900585_g53481_i0 PRJNA1061474 53727 244 0.900585 2.1974274 Thermoplasmata archaeon 1906666 Archaea Archaea 128 3.3099999999999995e-32   NR HJX04969.1 1906666 g53481 i0 82.5 1.95491803278689 80 14 98.4 0 3 242 554 633 HJX04969.1 GAF domain-containing protein [Thermoplasmata archaeon] diamond 477 128 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28858806 28858806 PRJNA1061474_P_NODE_51128_length_246_cov_0.890173_g50882_i0 PRJNA1061474 51128 246 0.890173 2.18982558 Methanocella 570266 Archaea Archaea 43.9 0.00221   NR WP_128860083.1 570267 g50882 i0 88 0.914634146341463 25 3 30.5 0 76 2 1 25 WP_128860083.1 hypothetical protein [Methanocella paludicola] diamond 225 44.3 0.99097065462754 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
29277435 29277435 PRJNA1061474_P_NODE_56389_length_242_cov_0.911243_g56143_i0 PRJNA1061474 56389 242 0.911243 2.20520806 Euryarchaeota archaeon RBG_19FT_COMBO_56_21 1797983 Archaea Archaea 92 1.98e-20   NR OGS57254.1 1797983 g56143 i0 91.5 3.49586776859504 47 4 58.3 0 101 241 1 47 OGS57254.1 MAG: MBL fold metallo-hydrolase [Euryarchaeota archaeon RBG_19FT_COMBO_56_21] diamond 846 92 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_19FT_COMBO_56_21
29530244 29530244 PRJNA1061474_P_NODE_50350_length_247_cov_0.885057_g50104_i0 PRJNA1061474 50350 247 0.885057 2.18609079 Methanocella arvoryzae 1175445 Archaea Archaea 91.7 5.8800000000000005e-21   NR WP_012036701.1 1175445 g50104 i0 55.8 0.935222672064777 77 34 93.5 0 245 15 16 92 WP_012036701.1 DUF7287 family protein [Methanocella arvoryzae] diamond 231 91.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella arvoryzae
30129910 30129910 PRJNA1061474_P_NODE_49272_length_248_cov_0.880000_g49026_i0 PRJNA1061474 49272 248 0.88 2.1824 Methanoregula sp. 2052170 Archaea Archaea 144 2.76e-40   NR MDD3137330.1 2052170 g49026 i0 79.3 2.9758064516129 82 17 99.2 0 246 1 58 139 MDD3137330.1 phosphoesterase [Methanoregula sp.] diamond 738 144 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
30635602 30635602 PRJNA1061474_P_NODE_50413_length_247_cov_0.885057_g50167_i0 PRJNA1061474 50413 247 0.885057 2.18609079 Euryarchaeota archaeon RBG_19FT_COMBO_56_21 1797983 Archaea Archaea 124 3.96e-32   NR OGS55525.1 1797983 g50167 i0 72 0.995951417004049 82 23 99.6 0 2 247 189 270 OGS55525.1 MAG: hypothetical protein A3K60_05130 [Euryarchaeota archaeon RBG_19FT_COMBO_56_21] diamond 246 124 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon RBG_19FT_COMBO_56_21
31014932 31014932 PRJNA1061474_P_NODE_51955_length_246_cov_0.890173_g51709_i0 PRJNA1061474 51955 246 0.890173 2.18982558 Methanothrix sp. 90426 Archaea Archaea 68.9 2.27e-11   NR MBK7386536.1 90426 g51709 i0 63.3 0.597560975609756 49 18 59.8 0 245 99 157 205 MBK7386536.1 C39 family peptidase [Methanothrix sp.] diamond 147 68.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
31078297 31078297 PRJNA1061474_P_NODE_48495_length_249_cov_0.875000_g48249_i0 PRJNA1061474 48495 249 0.875 2.17875 Euryarchaeota archaeon CG 2026739 Archaea Archaea 99.4 8.37e-25   NR PIV68581.1 1975560 g48249 i0 55.6 0.975903614457831 81 36 97.6 0 249 7 16 96 PIV68581.1 MAG: hypothetical protein COS08_06330 [Euryarchaeota archaeon CG01_land_8_20_14_3_00_38_12] diamond 243 99.4 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon CG01_land_8_20_14_3_00_38_12
31394448 31394448 PRJNA1061474_P_NODE_47996_length_249_cov_0.875000_g47750_i0 PRJNA1061474 47996 249 0.875 2.17875 Methanobacteriota archaeon 2026739 Archaea Archaea 166 9.89e-51   NR MCX6657661.1 2026739 g47750 i0 98.8 2 83 1 100 0 1 249 25 107 MCX6657661.1 DUF835 domain-containing protein [Methanobacteriota archaeon] diamond 498 166 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31615680 31615680 PRJNA1061474_P_NODE_48156_length_249_cov_0.875000_g47910_i0 PRJNA1061474 48156 249 0.875 2.17875 Thermoplasmatota archaeon 2806419 Archaea Archaea 137 1.06e-36   NR MBU0684409.1 2806419 g47910 i0 89 1.97590361445783 82 9 98.8 0 2 247 347 428 MBU0684409.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein [Thermoplasmatota archaeon] diamond 492 137 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
31742090 31742090 PRJNA1061474_P_NODE_47797_length_249_cov_0.875000_g47551_i0 PRJNA1061474 47797 249 0.875 2.17875 Methanoregulaceae archaeon 2485498 Archaea Archaea 111 6.4000000000000005e-27   NR HVP94101.1 2485498 g47551 i0 92.9 0.674698795180723 56 4 67.5 0 168 1 1 56 HVP94101.1 4Fe-4S binding protein [Methanoregulaceae archaeon] diamond 168 111 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;