RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1061474" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA1061474 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7831476 7831476 PRJNA1061474_P_NODE_49067_length_248_cov_0.880000_g48821_i0 PRJNA1061474 49067 248 0.88 2.1824 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 145 8.91e-39   NR XP_002683156.1 5762 g48821 i0 84.1 2.9758064516129 82 13 99.2 0 3 248 218 299 XP_002683156.1 fumarate hydratase class I [Naegleria gruberi] diamond 738 146 0.993150684931507 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28519956 28519956 PRJNA1061474_P_NODE_57687_length_241_cov_0.916667_g57441_i0 PRJNA1061474 57687 241 0.916667 2.20916747 Acrasis kona 1008807 Heterolobosea other_Eukaryota 132 1.95e-36   NR KAL0491734.1 1008807 g57441 i0 82.5 0.995850622406639 80 13 99.6 1 240 1 3 81 KAL0491734.1 tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Acrasis kona] diamond 240 132 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29017119 29017119 PRJNA1061474_P_NODE_34028_length_313_cov_1.362500_g33782_i0 PRJNA1061474 34028 313 1.3625 4.264625 root 1 Root_unresolved Root_unresolved 42.4 0.0359   NR XP_044562392.1 5763 g33782 i0 37 2.47284345047923 73 38 63.3 3 204 7 8 79 XP_044562392.1 uncharacterized protein FDP41_003001 [Naegleria fowleri] diamond 774 42.7 0.992974238875878 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29119948 29119948 PRJNA1061474_P_NODE_54569_length_244_cov_0.871345_g54323_i0 PRJNA1061474 54569 244 0.871345 2.1260818 Acrasis kona 1008807 Heterolobosea other_Eukaryota 131 3.3000000000000003e-34   NR KAL0484783.1 1008807 g54323 i0 77.5 0.983606557377049 80 18 98.4 0 242 3 205 284 KAL0484783.1 hypothetical protein AKO1_003693 [Acrasis kona] diamond 240 131 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29435170 29435170 PRJNA1061474_P_NODE_46950_length_250_cov_0.870056_g46704_i0 PRJNA1061474 46950 250 0.870056 2.17514 Acrasis kona 1008807 Heterolobosea other_Eukaryota 147 4.609999999999999e-43   NR KAL0488046.1 1008807 g46704 i0 92.8 0.996 83 6 99.6 0 2 250 70 152 KAL0488046.1 ribosomal protein S9 [Acrasis kona] diamond 249 147 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30477939 30477939 PRJNA1061474_P_NODE_53933_length_244_cov_0.900585_g53687_i0 PRJNA1061474 53933 244 0.900585 2.1974274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 126 4.39e-35   NR KAL0482313.1 1008807 g53687 i0 72.5 0.983606557377049 80 22 98.4 0 3 242 42 121 KAL0482313.1 peroxiredoxin [Acrasis kona] diamond 240 126 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31742084 31742084 PRJNA1061474_P_NODE_24017_length_391_cov_1.613208_g23771_i0 PRJNA1061474 24017 391 1.613208 6.30764328 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 76.3 7.2e-15   NR CAG4717221.1 5763 g23771 i0 38.8 1.95652173913043 85 46 60.6 1 389 153 16 100 CAG4717221.1 unnamed protein product [Naegleria fowleri] diamond 765 76.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;