RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1059246" and tax_phylum = "Tardigrada"

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tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1059246 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7829818 7829818 PRJNA1059246_P_NODE_52127_length_283_cov_1.100000_g51501_i0 PRJNA1059246 52127 283 1.1 3.113 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 159 3.16e-43   NR GAV03839.1 947166 g51501 i0 79.6 3.9434628975265 93 19 98.6 0 280 2 182 274 GAV03839.1 hypothetical protein RvY_14214 [Ramazzottius varieornatus] diamond 1116 159 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
27351756 27351756 PRJNA1059246_P_NODE_8323_length_842_cov_1.266580_g7812_i0 PRJNA1059246 8323 842 1.26658 10.6646036 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 233 4.0899999999999994e-67   NR GAV03424.1 947166 g7812 i0 47.6 2.69714964370546 252 120 89.1 6 3 752 28 269 GAV03424.1 hypothetical protein RvY_13849-2 [Ramazzottius varieornatus] diamond 2271 233 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
27541103 27541103 PRJNA1059246_P_NODE_8744_length_820_cov_2.692102_g8229_i0 PRJNA1059246 8744 820 2.692102 22.0752364 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 184 3.09e-53   NR XP_055350779.1 2943436 g8229 i0 51.4 0.669512195121951 183 86 66.6 3 626 81 94 274 XP_055350779.1 uncharacterized protein LOC129597320 [Paramacrobiotus metropolitanus] diamond 549 184 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
27667408 27667408 PRJNA1059246_P_NODE_38524_length_345_cov_1.106618_g37898_i0 PRJNA1059246 38524 345 1.106618 3.8178321 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 51.6 8.64e-5   NR XP_055351250.1 2943436 g37898 i0 37.1 1.30434782608696 89 52 76.5 2 336 73 3 88 XP_055351250.1 sequestosome-1-like [Paramacrobiotus metropolitanus] diamond 450 51.6 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
28361767 28361767 PRJNA1059246_P_NODE_42266_length_325_cov_1.222222_g41640_i0 PRJNA1059246 42266 325 1.222222 3.9722215 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 154 1.53e-44   NR GAV00527.1 947166 g41640 i0 70 0.923076923076923 100 29 92.3 1 300 1 89 187 GAV00527.1 hypothetical protein RvY_11360 [Ramazzottius varieornatus] diamond 300 154 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
28456721 28456721 PRJNA1059246_P_NODE_33266_length_376_cov_1.749175_g32640_i0 PRJNA1059246 33266 376 1.749175 6.576898 Hypsibius exemplaris 2072580 Tardigrada other_Eukaryota 78.2 6.4e-15   NR OWA50473.1 2072580 g32640 i0 61.7 1.53989361702128 60 23 47.9 0 179 358 1 60 OWA50473.1 putative Glutathione S-transferase 1 [Hypsibius exemplaris] diamond 579 78.2 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
29561573 29561573 PRJNA1059246_P_NODE_66970_length_246_cov_0.890173_g66344_i0 PRJNA1059246 66970 246 0.890173 2.18982558 Ramazzottius varieornatus 947166 Tardigrada other_Eukaryota 43.5 0.00503   NR GAV02702.1 947166 g66344 i0 64.3 1 28 10 34.1 0 245 162 67 94 GAV02702.1 hypothetical protein RvY_13233 [Ramazzottius varieornatus] diamond 246 43.5 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Ramazzottiidae Ramazzottius Ramazzottius varieornatus
29940834 29940834 PRJNA1059246_P_NODE_61551_length_251_cov_0.887640_g60925_i0 PRJNA1059246 61551 251 0.88764 2.2279764 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 55.8 9.59e-7   NR XP_055329624.1 2943436 g60925 i0 50 0.717131474103586 60 30 71.7 0 72 251 346 405 XP_055329624.1 interferon-inducible GTPase 5-like [Paramacrobiotus metropolitanus] diamond 180 55.8 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
30098467 30098467 PRJNA1059246_P_NODE_44112_length_316_cov_1.267490_g43486_i0 PRJNA1059246 44112 316 1.26749 4.0052684 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 76.6 7.75e-14   NR XP_055329972.1 2943436 g43486 i0 46.5 0.939873417721519 99 50 94 3 314 18 152 247 XP_055329972.1 uncharacterized protein LOC129582483 [Paramacrobiotus metropolitanus] diamond 297 76.6 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
30880263 30880263 PRJNA1059246_P_NODE_71174_length_242_cov_0.911243_g70548_i0 PRJNA1059246 71174 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 60.1 2.8e-8   NR OQV16299.1 2072580 g70548 i0 55.1 1.77272727272727 49 22 60.7 0 157 11 65 113 OQV16299.1 hypothetical protein BV898_09607 [Hypsibius exemplaris] diamond 429 60.5 0.993388429752066 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Hypsibiidae Hypsibius Hypsibius exemplaris
31109533 31109533 PRJNA1059246_P_NODE_69015_length_244_cov_0.900585_g68389_i0 PRJNA1059246 69015 244 0.900585 2.1974274 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 53.5 4.58e-6   NR XP_055351563.1 2943436 g68389 i0 47.5 1.5 61 32 75 0 244 62 196 256 XP_055351563.1 syntaxin-12-like isoform X3 [Paramacrobiotus metropolitanus] diamond 366 53.5 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;