RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1,105 rows where analysis = "diamond", bioproject = "PRJNA1059246" and tax_phylum = "Pseudomonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 1,105 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1059246 · 1,105 ✖

analysis 1

  • diamond · 1,105 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
177131 177131 PRJNA1059246_P_NODE_42221_length_325_cov_1.575397_g41595_i0 PRJNA1059246 42221 325 1.575397 5.12004025 Sphingomonadaceae 41297 Bacteria Bacteria 194 1.34e-57   NR WP_070156702.1 41297 g41595 i0 100 0.867692307692308 94 0 86.8 0 325 44 394 487 WP_070156702.1 MULTISPECIES: benzaldehyde dehydrogenase [Sphingomonadaceae] diamond 282 194 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
177154 177154 PRJNA1059246_P_NODE_44001_length_317_cov_0.901639_g43375_i0 PRJNA1059246 44001 317 0.901639 2.85819563 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 211 1.85e-65   NR WP_211962764.1 2631580 g43375 i0 100 0.993690851735016 105 0 99.4 0 2 316 49 153 WP_211962764.1 MULTISPECIES: acyltransferase family protein [unclassified Bradyrhizobium] diamond 315 211 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
177223 177223 PRJNA1059246_P_NODE_49741_length_290_cov_1.147465_g49115_i0 PRJNA1059246 49741 290 1.147465 3.3276485 Acetobacteraceae bacterium 1909293 Bacteria Bacteria 175 2.21e-48   NR HUB47360.1 1909293 g49115 i0 85.3 0.982758620689655 95 14 98.3 0 290 6 684 778 HUB47360.1 formate dehydrogenase [Acetobacteraceae bacterium] diamond 285 175 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae   Acetobacteraceae bacterium
177236 177236 PRJNA1059246_P_NODE_51101_length_286_cov_1.122066_g50475_i0 PRJNA1059246 51101 286 1.122066 3.20910876 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 184 2.1099999999999997e-56   NR WP_211970160.1 2631580 g50475 i0 100 0.975524475524476 93 0 97.6 0 7 285 1 93 WP_211970160.1 MULTISPECIES: enoyl-CoA hydratase/isomerase family protein [unclassified Bradyrhizobium] diamond 279 184 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
177303 177303 PRJNA1059246_P_NODE_55881_length_271_cov_1.166667_g55255_i0 PRJNA1059246 55881 271 1.166667 3.16166757 Ralstonia sp. 54061 Bacteria Bacteria 134 1.12e-37   NR MBL4779284.1 54061 g55255 i0 100 1.37269372693727 60 0 66.4 0 181 2 89 148 MBL4779284.1 hypothetical protein [Ralstonia sp.] diamond 372 134 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia sp.
177308 177308 PRJNA1059246_P_NODE_56601_length_268_cov_1.974359_g55975_i0 PRJNA1059246 56601 268 1.974359 5.29128212 Alphaproteobacteria 28211 Bacteria Bacteria 176 4.99e-49   NR WP_372888905.1 28214 g55975 i0 100 1.99253731343284 89 0 99.6 0 267 1 1946 2034 WP_372888905.1 tandem-95 repeat protein [Sphingomonas sp.] diamond 534 176 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
177326 177326 PRJNA1059246_P_NODE_58401_length_262_cov_1.423280_g57775_i0 PRJNA1059246 58401 262 1.42328 3.7289936 Alphaproteobacteria 28211 Bacteria Bacteria 145 1.4e-40   NR MDE2199354.1 2026786 g57775 i0 80.5 3.97328244274809 87 17 99.6 0 261 1 210 296 MDE2199354.1 dihydrodipicolinate synthase family protein [Rhodospirillales bacterium] diamond 1041 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales     Rhodospirillales bacterium
177375 177375 PRJNA1059246_P_NODE_62281_length_251_cov_0.865169_g61655_i0 PRJNA1059246 62281 251 0.865169 2.17157419 Burkholderiales bacterium 1891238 Bacteria Bacteria 125 3.77e-33   NR MCZ8098102.1 1891238 g61655 i0 70.7 2.86852589641434 82 24 98 0 247 2 63 144 MCZ8098102.1 formyltetrahydrofolate deformylase [Burkholderiales bacterium] diamond 720 125 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
177377 177377 PRJNA1059246_P_NODE_62381_length_250_cov_1.717514_g61755_i0 PRJNA1059246 62381 250 1.717514 4.293785 Belnapia sp. F-4-1 1545443 Bacteria Bacteria 112 1.24e-26   NR WP_082012700.1 1545443 g61755 i0 71.1 0.996 83 24 99.6 0 250 2 187 269 WP_082012700.1 AAA family ATPase [Belnapia sp. F-4-1] diamond 249 112 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Roseomonadaceae Belnapia Belnapia sp. F-4-1
177385 177385 PRJNA1059246_P_NODE_62861_length_250_cov_0.870056_g62235_i0 PRJNA1059246 62861 250 0.870056 2.17514 Acetobacteraceae bacterium 1909293 Bacteria Bacteria 128 1.35e-33   NR MBC7799217.1 1909293 g62235 i0 75.6 0.984 82 20 98.4 0 3 248 67 148 MBC7799217.1 MiaB/RimO family radical SAM methylthiotransferase [Acetobacteraceae bacterium] diamond 246 128 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae   Acetobacteraceae bacterium
177400 177400 PRJNA1059246_P_NODE_63781_length_249_cov_0.875000_g63155_i0 PRJNA1059246 63781 249 0.875 2.17875 Sphingomonas 13687 Bacteria Bacteria 127 8.35e-35   NR WP_163958652.1 424800 g63155 i0 77.5 4.80722891566265 80 18 96.4 0 2 241 99 178 WP_163958652.1 class I SAM-dependent methyltransferase [Sphingomonas insulae] diamond 1197 127 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas insulae
177499 177499 PRJNA1059246_P_NODE_69901_length_243_cov_1.364706_g69275_i0 PRJNA1059246 69901 243 1.364706 3.31623558 Methylobacterium sp. GC_Met_2 2937376 Bacteria Bacteria 60.5 1.91e-8   NR WP_267426359.1 2937376 g69275 i0 85.3 0.839506172839506 34 5 42 0 163 62 324 357 WP_267426359.1 baseplate J/gp47 family protein [Methylobacterium sp. GC_Met_2] diamond 204 60.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. GC_Met_2
1011530 1011530 PRJNA1059246_P_NODE_46941_length_303_cov_1.182609_g46315_i0 PRJNA1059246 46941 303 1.182609 3.58330527 Sphingomonas sp. EC-HK361 2038397 Bacteria Bacteria 166 2.71e-47   NR WP_199857379.1 2038397 g46315 i0 98.8 0.801980198019802 81 1 80.2 0 3 245 366 446 WP_199857379.1 ImmA/IrrE family metallo-endopeptidase [Sphingomonas sp. EC-HK361] diamond 243 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. EC-HK361
1011585 1011585 PRJNA1059246_P_NODE_63441_length_249_cov_1.750000_g62815_i0 PRJNA1059246 63441 249 1.75 4.3575 unclassified Sphingomonas 196159 Bacteria Bacteria 172 1.68e-49   NR WP_286711109.1 196159 g62815 i0 100 0.987951807228916 82 0 98.8 0 3 248 74 155 WP_286711109.1 MULTISPECIES: acyl-CoA synthetase [unclassified Sphingomonas] diamond 246 172 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas  
1451526 1451526 PRJNA1059246_P_NODE_26322_length_433_cov_1.711111_g25697_i0 PRJNA1059246 26322 433 1.711111 7.40911063 Sphingomonadaceae 41297 Bacteria Bacteria 270 9.3e-84   NR WP_070156411.1 41297 g25697 i0 100 0.990762124711316 143 0 99.1 0 3 431 382 524 WP_070156411.1 MULTISPECIES: NADP-dependent malic enzyme [Sphingomonadaceae] diamond 429 270 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
1451582 1451582 PRJNA1059246_P_NODE_30362_length_397_cov_1.663580_g29736_i0 PRJNA1059246 30362 397 1.66358 6.6044126 Sphingomonadaceae 41297 Bacteria Bacteria 163 6.469999999999999e-46   NR WP_151956017.1 196159 g29736 i0 100 1.19395465994962 79 0 59.7 0 397 161 311 389 WP_151956017.1 MULTISPECIES: muconate/chloromuconate family cycloisomerase [unclassified Sphingomonas] diamond 474 163 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas  
1451592 1451592 PRJNA1059246_P_NODE_31302_length_390_cov_0.971609_g30676_i0 PRJNA1059246 31302 390 0.971609 3.7892751 root 1 Root_unresolved Root_unresolved 156 2.2699999999999998e-42   NR WP_249919453.1 286 g30676 i0 63.3 37.4692307692308 128 47 98.5 0 386 3 45 172 WP_249919453.1 MULTISPECIES: CoA-acylating methylmalonate-semialdehyde dehydrogenase [Pseudomonas] diamond 14613 157 0.993630573248408 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas  
1451693 1451693 PRJNA1059246_P_NODE_37662_length_349_cov_1.655797_g37036_i0 PRJNA1059246 37662 349 1.655797 5.77873153 Ralstonia 48736 Bacteria Bacteria 227 8.439999999999999e-72   NR WP_004632796.1 48736 g37036 i0 100 0.97134670487106 113 0 97.1 0 9 347 1 113 WP_004632796.1 MULTISPECIES: ABC-three component system protein [Ralstonia] diamond 339 227 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
1451905 1451905 PRJNA1059246_P_NODE_54122_length_276_cov_2.034483_g53496_i0 PRJNA1059246 54122 276 2.034483 5.61517308 Acidovorax sp. MR-S7 1268622 Bacteria Bacteria 176 6.670000000000002e-51   NR WP_020230860.1 1268622 g53496 i0 95.6 0.989130434782609 91 4 98.9 0 274 2 295 385 WP_020230860.1 sigma-54-dependent transcriptional regulator [Acidovorax sp. MR-S7] diamond 273 176 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. MR-S7
1451908 1451908 PRJNA1059246_P_NODE_54302_length_276_cov_1.261084_g53676_i0 PRJNA1059246 54302 276 1.261084 3.48059184 uncultured Enterovirga sp. 2026352 Bacteria Bacteria 156 1.98e-43   NR WP_375462066.1 2026352 g53676 i0 84.4 1.95652173913043 90 14 97.8 0 274 5 355 444 WP_375462066.1 cytochrome ubiquinol oxidase subunit I [uncultured Enterovirga sp.] diamond 540 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Enterovirga uncultured Enterovirga sp.
1451936 1451936 PRJNA1059246_P_NODE_56742_length_268_cov_1.225641_g56116_i0 PRJNA1059246 56742 268 1.225641 3.28471788 Bradyrhizobium 374 Bacteria Bacteria 119 6.41e-31   NR WP_349644752.1 2631580 g56116 i0 100 1.27611940298507 57 0 63.8 0 267 97 218 274 WP_349644752.1 MULTISPECIES: DUF3298 and DUF4163 domain-containing protein [unclassified Bradyrhizobium] diamond 342 119 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1451989 1451989 PRJNA1059246_P_NODE_61062_length_252_cov_1.703911_g60436_i0 PRJNA1059246 61062 252 1.703911 4.29385572 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 172 4.58e-50   NR WP_349644679.1 2631580 g60436 i0 98.8 0.988095238095238 83 1 98.8 0 2 250 123 205 WP_349644679.1 MULTISPECIES: TIGR03862 family flavoprotein [unclassified Bradyrhizobium] diamond 249 172 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1452011 1452011 PRJNA1059246_P_NODE_62542_length_250_cov_1.254237_g61916_i0 PRJNA1059246 62542 250 1.254237 3.1355925 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 158 8.209999999999999e-43   NR WP_211966914.1 2631580 g61916 i0 98.8 0.984 82 1 98.4 0 246 1 691 772 WP_211966914.1 MULTISPECIES: PAS-domain containing protein [unclassified Bradyrhizobium] diamond 246 158 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1452045 1452045 PRJNA1059246_P_NODE_65042_length_248_cov_0.880000_g64416_i0 PRJNA1059246 65042 248 0.88 2.1824 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 172 3.01e-48   NR WP_211966325.1 2631580 g64416 i0 100 0.991935483870968 82 0 99.2 0 1 246 542 623 WP_211966325.1 MULTISPECIES: DNA primase [unclassified Bradyrhizobium] diamond 246 172 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1452138 1452138 PRJNA1059246_P_NODE_71402_length_242_cov_0.911243_g70776_i0 PRJNA1059246 71402 242 0.911243 2.20520806 Novosphingobium 165696 Bacteria Bacteria 164 1.88e-48   NR MBY0394010.1 1874826 g70776 i0 97.5 1.98347107438017 80 2 99.2 0 242 3 67 146 MBY0394010.1 urate hydroxylase PuuD [Novosphingobium sp.] diamond 480 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium sp.
2286733 2286733 PRJNA1059246_P_NODE_41502_length_329_cov_1.203125_g40876_i0 PRJNA1059246 41502 329 1.203125 3.95828125 Ralstonia 48736 Bacteria Bacteria 228 1.9199999999999996e-73   NR WP_004636992.1 48736 g40876 i0 100 0.993920972644377 109 0 99.4 0 3 329 43 151 WP_004636992.1 MULTISPECIES: hypothetical protein [Ralstonia] diamond 327 228 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
2286779 2286779 PRJNA1059246_P_NODE_54522_length_275_cov_1.524752_g53896_i0 PRJNA1059246 54522 275 1.524752 4.193068 Sphingomonas melonis 152682 Bacteria Bacteria 156 8.74e-43   NR WP_179507618.1 152682 g53896 i0 95.6 0.992727272727273 91 4 99.3 0 3 275 31 121 WP_179507618.1 IS66 family transposase [Sphingomonas melonis] diamond 273 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas melonis
2286790 2286790 PRJNA1059246_P_NODE_59422_length_258_cov_1.821622_g58796_i0 PRJNA1059246 59422 258 1.821622 4.69978476 Sphingomonas sp. 28214 Bacteria Bacteria 88.2 2.91e-19   NR MFM9827180.1 28214 g58796 i0 71.9 0.744186046511628 64 18 74.4 0 196 5 1 64 MFM9827180.1 HAD family hydrolase [Sphingomonas sp.] diamond 192 88.2 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
2727330 2727330 PRJNA1059246_P_NODE_20503_length_502_cov_1.065268_g19885_i0 PRJNA1059246 20503 502 1.065268 5.34764536 Ralstonia 48736 Bacteria Bacteria 329 5.649999999999999e-110   NR WP_004628172.1 48736 g19885 i0 100 0.99800796812749 167 0 99.8 0 2 502 145 311 WP_004628172.1 MULTISPECIES: tyrosine-type recombinase/integrase [Ralstonia] diamond 501 329 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
2727428 2727428 PRJNA1059246_P_NODE_26463_length_432_cov_1.272981_g25838_i0 PRJNA1059246 26463 432 1.272981 5.49927792 Motilimonas 1914248 Bacteria Bacteria 177 2.03e-50   NR MFM7067034.1 1913989 g25838 i0 63.3 12.5694444444444 139 51 96.5 0 417 1 193 331 MFM7067034.1 NADP-dependent isocitrate dehydrogenase [Gammaproteobacteria bacterium] diamond 5430 177 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
2727477 2727477 PRJNA1059246_P_NODE_29783_length_402_cov_1.404255_g29158_i0 PRJNA1059246 29783 402 1.404255 5.6451051 Sphingomonadaceae 41297 Bacteria Bacteria 111 2.9100000000000004e-26   NR WP_070156425.1 41297 g29158 i0 100 0.813432835820896 53 0 39.6 0 65 223 306 358 WP_070156425.1 MULTISPECIES: 2Fe-2S iron-sulfur cluster-binding protein [Sphingomonadaceae] diamond 327 111 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
2727565 2727565 PRJNA1059246_P_NODE_36343_length_357_cov_1.084507_g35717_i0 PRJNA1059246 36343 357 1.084507 3.87168999 Neisseriaceae bacterium ESL0693 2983239 Bacteria Bacteria 164 1.34e-46   NR MDF7676540.1 2983239 g35717 i0 69.5 13.8823529411765 118 35 99.2 1 356 3 269 385 MDF7676540.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Neisseriaceae bacterium ESL0693] diamond 4956 164 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae   Neisseriaceae bacterium ESL0693
2727572 2727572 PRJNA1059246_P_NODE_37043_length_353_cov_1.100000_g36417_i0 PRJNA1059246 37043 353 1.1 3.883 Sphingomonadaceae 41297 Bacteria Bacteria 188 2.32e-57   NR WP_199857382.1 41297 g36417 i0 100 0.790368271954674 93 0 79 0 2 280 171 263 WP_199857382.1 MULTISPECIES: ABC transporter ATP-binding protein [Sphingomonadaceae] diamond 279 188 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
2727581 2727581 PRJNA1059246_P_NODE_37703_length_349_cov_1.315217_g37077_i0 PRJNA1059246 37703 349 1.315217 4.59010733 Allosphingosinicella sp. 2823234 Bacteria Bacteria 205 3.5499999999999996e-60   NR MFN3943923.1 2823234 g37077 i0 80.2 0.997134670487106 116 23 99.7 0 348 1 49 164 MFN3943923.1 DNA cytosine methyltransferase [Allosphingosinicella sp.] diamond 348 205 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Allosphingosinicella Allosphingosinicella sp.
2727614 2727614 PRJNA1059246_P_NODE_40523_length_334_cov_1.180077_g39897_i0 PRJNA1059246 40523 334 1.180077 3.94145718 Alphaproteobacteria 28211 Bacteria Bacteria 225 1.08e-72   NR WP_209516606.1 28211 g39897 i0 100 0.988023952095808 110 0 98.8 0 3 332 45 154 WP_209516606.1 MULTISPECIES: conjugal transfer protein TrbF [Alphaproteobacteria] diamond 330 225 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria        
2727659 2727659 PRJNA1059246_P_NODE_44443_length_314_cov_2.871369_g43817_i0 PRJNA1059246 44443 314 2.871369 9.01609866 Rickettsiales bacterium 2026788 Bacteria Bacteria 151 7.879999999999999e-45   NR PCJ22838.1 2026788 g43817 i0 76.2 7.0031847133758 105 24 99.4 1 3 314 30 134 PCJ22838.1 MAG: hypothetical protein COA94_08735 [Rickettsiales bacterium] diamond 2199 151 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rickettsiales     Rickettsiales bacterium
2727719 2727719 PRJNA1059246_P_NODE_50663_length_287_cov_1.439252_g50037_i0 PRJNA1059246 50663 287 1.439252 4.13065324 Burkholderia 32008 Bacteria Bacteria 175 2.16e-48   NR WP_129516301.1 95485 g50037 i0 93.7 1.98606271777003 95 6 99.3 0 3 287 657 751 WP_129516301.1 ATP-binding protein [Burkholderia stabilis] diamond 570 175 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia Burkholderia stabilis
2727745 2727745 PRJNA1059246_P_NODE_53283_length_279_cov_1.354369_g52657_i0 PRJNA1059246 53283 279 1.354369 3.77868951 Burkholderiales bacterium 1891238 Bacteria Bacteria 182 2.0399999999999998e-52   NR MCX7263755.1 1891238 g52657 i0 100 0.989247311827957 92 0 98.9 0 3 278 110 201 MCX7263755.1 phosphoenolpyruvate--protein phosphotransferase [Burkholderiales bacterium] diamond 276 182 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
2727793 2727793 PRJNA1059246_P_NODE_56523_length_269_cov_1.051020_g55897_i0 PRJNA1059246 56523 269 1.05102 2.8272438 Sphingomonas bacterium 1895847 Bacteria Bacteria 87 1.34e-17   NR WP_299645560.1 1895847 g55897 i0 59 0.869888475836431 78 29 83.6 1 36 260 1 78 WP_299645560.1 tetratricopeptide repeat protein [Sphingomonas bacterium] diamond 234 87 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas bacterium
2727876 2727876 PRJNA1059246_P_NODE_62643_length_250_cov_0.870056_g62017_i0 PRJNA1059246 62643 250 0.870056 2.17514 Rhodospirillaceae bacterium 1898112 Bacteria Bacteria 125 2.76e-33   NR MBX7198207.1 1898112 g62017 i0 79 0.972 81 17 97.2 0 248 6 135 215 MBX7198207.1 DUF2189 domain-containing protein [Rhodospirillaceae bacterium] diamond 243 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Rhodospirillaceae   Rhodospirillaceae bacterium
2727901 2727901 PRJNA1059246_P_NODE_64923_length_248_cov_0.880000_g64297_i0 PRJNA1059246 64923 248 0.88 2.1824 Methylobacterium 407 Bacteria Bacteria 129 4.29e-35   NR WP_056142213.1 407 g64297 i0 74.4 2.96370967741935 82 21 99.2 0 247 2 35 116 WP_056142213.1 MULTISPECIES: urease subunit beta [Methylobacterium] diamond 735 129 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
2727948 2727948 PRJNA1059246_P_NODE_69243_length_244_cov_0.900585_g68617_i0 PRJNA1059246 69243 244 0.900585 2.1974274 Panacagrimonas sp. 2480088 Bacteria Bacteria 102 2e-23   NR MCC2657031.1 2480088 g68617 i0 86.8 1.29098360655738 53 7 65.2 0 159 1 279 331 MCC2657031.1 hypothetical protein [Panacagrimonas sp.] diamond 315 102 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Nevskiales Nevskiaceae Panacagrimonas Panacagrimonas sp.
3562069 3562069 PRJNA1059246_P_NODE_12243_length_680_cov_1.299835_g11665_i0 PRJNA1059246 12243 680 1.299835 8.838878 Ralstonia 48736 Bacteria Bacteria 295 1.3399999999999999e-95   NR WP_004627194.1 48736 g11665 i0 100 0.657352941176471 149 0 65.7 0 448 2 1 149 WP_004627194.1 MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase [Ralstonia] diamond 447 295 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
3562185 3562185 PRJNA1059246_P_NODE_46483_length_305_cov_1.392241_g45857_i0 PRJNA1059246 46483 305 1.392241 4.24633505 root 1 Root_unresolved Root_unresolved 91.3 6.66e-19   NR WP_007585121.1 169430 g45857 i0 70.5 13.0918032786885 61 18 60 0 303 121 491 551 WP_007585121.1 GMC family oxidoreductase [Paraburkholderia hospita] diamond 3993 91.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Paraburkholderia Paraburkholderia hospita
4003254 4003254 PRJNA1059246_P_NODE_19144_length_523_cov_1.662222_g18526_i0 PRJNA1059246 19144 523 1.662222 8.69342106 Pseudomonadota bacterium 1977087 Bacteria Bacteria 186 3.8e-54   NR MFM2247828.1 1977087 g18526 i0 68.8 7.98470363288719 125 39 71.7 0 12 386 264 388 MFM2247828.1 hypothetical protein [Pseudomonadota bacterium] diamond 4176 186 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
4003437 4003437 PRJNA1059246_P_NODE_33564_length_374_cov_1.531561_g32938_i0 PRJNA1059246 33564 374 1.531561 5.72803814 Ralstonia mannitolilytica 105219 Bacteria Bacteria 247 9.62e-79   NR WP_316685665.1 105219 g32938 i0 98.4 0.994652406417112 124 2 99.5 0 373 2 152 275 WP_316685665.1 Druantia anti-phage system protein DruA [Ralstonia mannitolilytica] diamond 372 247 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia mannitolilytica
4003643 4003643 PRJNA1059246_P_NODE_49584_length_290_cov_1.760369_g48958_i0 PRJNA1059246 49584 290 1.760369 5.1050701 Alphaproteobacteria 28211 Bacteria Bacteria 97.4 5.64e-23   NR WP_297773106.1 293344 g48958 i0 68.3 7.75862068965517 63 20 65.2 0 191 3 1 63 WP_297773106.1 dTDP-4-dehydrorhamnose 3,5-epimerase [uncultured Roseovarius sp.] diamond 2250 98.2 0.991853360488798 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Roseobacteraceae Roseovarius uncultured Roseovarius sp.
4003686 4003686 PRJNA1059246_P_NODE_52504_length_282_cov_0.980861_g51878_i0 PRJNA1059246 52504 282 0.980861 2.76602802 unclassified Sphingomonas 196159 Bacteria Bacteria 106 3.39e-25   NR WP_353681862.1 196159 g51878 i0 100 0.606382978723404 57 0 60.6 0 281 111 276 332 WP_353681862.1 MULTISPECIES: IS5 family transposase [unclassified Sphingomonas] diamond 171 106 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas  
4003687 4003687 PRJNA1059246_P_NODE_52564_length_281_cov_1.884615_g51938_i0 PRJNA1059246 52564 281 1.884615 5.29576815 Sphingomonas sp. Ant H11 1564113 Bacteria Bacteria 187 3.89e-56   NR WP_033966936.1 1564113 g51938 i0 100 0.99288256227758 93 0 99.3 0 279 1 283 375 WP_033966936.1 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase [Sphingomonas sp. Ant H11] diamond 279 187 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. Ant H11
4003729 4003729 PRJNA1059246_P_NODE_56204_length_270_cov_1.172589_g55578_i0 PRJNA1059246 56204 270 1.172589 3.1659903 Sphingomonadaceae 41297 Bacteria Bacteria 99 4.74e-22   NR WP_070156711.1 41297 g55578 i0 100 0.588888888888889 53 0 58.9 0 160 2 1 53 WP_070156711.1 MULTISPECIES: phosphopyruvate hydratase [Sphingomonadaceae] diamond 159 99 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
4003830 4003830 PRJNA1059246_P_NODE_65264_length_248_cov_0.880000_g64638_i0 PRJNA1059246 65264 248 0.88 2.1824 Hyphomicrobiales 356 Bacteria Bacteria 121 7.889999999999999e-30   NR MBX9709566.1 2021379 g64638 i0 80.5 9.91935483870968 82 16 99.2 0 3 248 277 358 MBX9709566.1 sigma 54-interacting transcriptional regulator [Xanthobacteraceae bacterium] diamond 2460 121 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae   Xanthobacteraceae bacterium
4003836 4003836 PRJNA1059246_P_NODE_65884_length_247_cov_0.885057_g65258_i0 PRJNA1059246 65884 247 0.885057 2.18609079 Mesorhizobium liriopis 2953882 Bacteria Bacteria 141 1.86e-39   NR WP_252818354.1 2953882 g65258 i0 80.5 0.995951417004049 82 16 99.6 0 2 247 136 217 WP_252818354.1 alpha/beta fold hydrolase [Mesorhizobium liriopis] diamond 246 141 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium liriopis
4839542 4839542 PRJNA1059246_P_NODE_51484_length_285_cov_1.080189_g50858_i0 PRJNA1059246 51484 285 1.080189 3.07853865 Alphaproteobacteria 28211 Bacteria Bacteria 100 1.21e-22   NR WP_294090641.1 28214 g50858 i0 54.7 6.09473684210526 95 42 98.9 1 285 4 152 246 WP_294090641.1 serine hydrolase domain-containing protein [Sphingomonas sp.] diamond 1737 101 0.99009900990099 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
4839591 4839591 PRJNA1059246_P_NODE_64544_length_248_cov_1.760000_g63918_i0 PRJNA1059246 64544 248 1.76 4.3648 Tardiphaga sp. 1926292 Bacteria Bacteria 117 3.63e-30   NR MDB5520715.1 1926292 g63918 i0 73.8 1.93548387096774 80 21 96.8 0 8 247 1 80 MDB5520715.1 glutamine amidotransferase class-I [Tardiphaga sp.] diamond 480 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Tardiphaga Tardiphaga sp.
5279672 5279672 PRJNA1059246_P_NODE_27165_length_425_cov_1.613636_g26540_i0 PRJNA1059246 27165 425 1.613636 6.857953 Pseudomonadota bacterium 1977087 Bacteria Bacteria 298 2.21e-99   NR MES2065566.1 1977087 g26540 i0 100 0.995294117647059 141 0 99.5 0 1 423 10 150 MES2065566.1 NAD(P)-dependent alcohol dehydrogenase [Pseudomonadota bacterium] diamond 423 298 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
5279839 5279839 PRJNA1059246_P_NODE_39945_length_337_cov_1.166667_g39319_i0 PRJNA1059246 39945 337 1.166667 3.93166779 Qipengyuania sediminis 1532023 Bacteria Bacteria 166 3.42e-45   NR WP_240782173.1 1532023 g39319 i0 84.8 0.881305637982196 99 15 88.1 0 41 337 1 99 WP_240782173.1 DEAD/DEAH box helicase [Qipengyuania sediminis] diamond 297 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Qipengyuania Qipengyuania sediminis
5279892 5279892 PRJNA1059246_P_NODE_4465_length_1178_cov_1.896833_g4088_i0 PRJNA1059246 4465 1178 1.896833 22.34469274 Ralstonia 48736 Bacteria Bacteria 504 1.4899999999999998e-177   NR WP_182611486.1 48736 g4088 i0 100 0.664685908319185 261 0 66.5 0 990 208 1 261 WP_182611486.1 MULTISPECIES: molybdate ABC transporter substrate-binding protein [Ralstonia] diamond 783 504 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
5279935 5279935 PRJNA1059246_P_NODE_47825_length_299_cov_0.929204_g47199_i0 PRJNA1059246 47825 299 0.929204 2.77831996 Bradyrhizobium sp. U87765 SZCCT0131 2807659 Bacteria Bacteria 184 1.53e-51   NR MBR1220900.1 2807659 g47199 i0 99 0.993311036789298 99 1 99.3 0 298 2 1870 1968 MBR1220900.1 filamentous hemagglutinin family protein [Bradyrhizobium sp. U87765 SZCCT0131] diamond 297 184 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. U87765 SZCCT0131
5279945 5279945 PRJNA1059246_P_NODE_49325_length_292_cov_0.849315_g48699_i0 PRJNA1059246 49325 292 0.849315 2.4799998 Methylorubrum 2282523 Bacteria Bacteria 64.3 1.85e-10   NR MEH3117612.1 223967 g48699 i0 85.7 1.43835616438356 35 5 36 0 188 292 71 105 MEH3117612.1 DUF1449 family protein [Methylorubrum populi] diamond 420 64.7 0.993817619783617 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum populi
5279957 5279957 PRJNA1059246_P_NODE_50305_length_288_cov_1.432558_g49679_i0 PRJNA1059246 50305 288 1.432558 4.12576704 Sphingomonas sp. 28214 Bacteria Bacteria 192 5.2999999999999996e-55   NR WP_287398414.1 28214 g49679 i0 100 0.989583333333333 95 0 99 0 287 3 411 505 WP_287398414.1 TonB-dependent receptor [Sphingomonas sp.] diamond 285 192 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
5279985 5279985 PRJNA1059246_P_NODE_52385_length_282_cov_1.315789_g51759_i0 PRJNA1059246 52385 282 1.315789 3.71052498 Pseudomonas sp. 306 Bacteria Bacteria 166 6.55e-47   NR TXH95728.1 306 g51759 i0 95.7 0.98936170212766 93 4 98.9 0 3 281 24 116 TXH95728.1 MAG: NAD(P)H-hydrate dehydratase, partial [Pseudomonas sp.] diamond 279 166 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas sp.
5280037 5280037 PRJNA1059246_P_NODE_56745_length_268_cov_1.220513_g56119_i0 PRJNA1059246 56745 268 1.220513 3.27097484 Rhabdaerophilum sp. SD176 2983548 Bacteria Bacteria 122 2.55e-31   NR WP_284179296.1 2983548 g56119 i0 69.8 8.76492537313433 86 26 96.3 0 3 260 5 90 WP_284179296.1 2-hydroxyacid dehydrogenase [Rhabdaerophilum sp. SD176] diamond 2349 122 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhabdaerophilaceae Rhabdaerophilum Rhabdaerophilum sp. SD176
5280135 5280135 PRJNA1059246_P_NODE_64925_length_248_cov_0.880000_g64299_i0 PRJNA1059246 64925 248 0.88 2.1824 Hyphomicrobiales 356 Bacteria Bacteria 101 1.11e-25   NR WP_307271197.1 425677 g64299 i0 70.4 1.70564516129032 54 16 65.3 0 1 162 47 100 WP_307271197.1 membrane protein insertion efficiency factor YidD [Labrys wisconsinensis] diamond 423 101 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae Labrys Labrys wisconsinensis
5280197 5280197 PRJNA1059246_P_NODE_70045_length_243_cov_0.905882_g69419_i0 PRJNA1059246 70045 243 0.905882 2.20129326 Pseudomonas fluvialis 1793966 Bacteria Bacteria 160 5.3000000000000003e-45   NR WP_184682921.1 1793966 g69419 i0 95.1 1 81 4 100 0 243 1 220 300 WP_184682921.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Pseudomonas fluvialis] diamond 243 160 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fluvialis
5280238 5280238 PRJNA1059246_P_NODE_73125_length_228_cov_2.483871_g72499_i0 PRJNA1059246 73125 228 2.483871 5.66322588 Oxalobacteraceae 75682 Bacteria Bacteria 132 9.12e-37   NR MEO8837972.1 1890675 g72499 i0 84 20.6710526315789 75 12 98.7 0 3 227 56 130 MEO8837972.1 GMP synthase (glutamine-hydrolyzing) [Herbaspirillum sp.] diamond 4713 133 0.992481203007519 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum Herbaspirillum sp.
6114625 6114625 PRJNA1059246_P_NODE_37885_length_348_cov_1.400000_g37259_i0 PRJNA1059246 37885 348 1.4 4.872 [Pseudomonas] carboxydohydrogena 290 Bacteria Bacteria 76.3 2.11e-14   NR WP_275248071.1 290 g37259 i0 43 1.60344827586207 93 42 80.2 1 344 66 113 194 WP_275248071.1 hypothetical protein [[Pseudomonas] carboxydohydrogena] diamond 558 76.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia carboxydohydrogena
6114717 6114717 PRJNA1059246_P_NODE_57865_length_264_cov_1.335079_g57239_i0 PRJNA1059246 57865 264 1.335079 3.52460856 Sphingomonadales bacterium 1978525 Bacteria Bacteria 110 1.08e-28   NR MBU6396178.1 1978525 g57239 i0 96.2 1.20454545454545 53 2 60.2 0 263 105 86 138 MBU6396178.1 carboxymuconolactone decarboxylase family protein [Sphingomonadales bacterium] diamond 318 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales     Sphingomonadales bacterium
6114735 6114735 PRJNA1059246_P_NODE_62965_length_250_cov_0.870056_g62339_i0 PRJNA1059246 62965 250 0.870056 2.17514 Tepidiphilus succinatimandens 224436 Bacteria Bacteria 164 4.899999999999999e-47   NR WP_206202278.1 224436 g62339 i0 97.6 0.996 83 2 99.6 0 249 1 62 144 WP_206202278.1 M20 aminoacylase family protein [Tepidiphilus succinatimandens] diamond 249 164 1 Bacteria   Pseudomonadati Pseudomonadota Hydrogenophilia Hydrogenophilales Hydrogenophilaceae Tepidiphilus Tepidiphilus succinatimandens
6554741 6554741 PRJNA1059246_P_NODE_18766_length_529_cov_2.208333_g18149_i0 PRJNA1059246 18766 529 2.208333 11.68208157 Bacteria 2 Bacteria Bacteria 278 7.35e-93   NR HSC16174.1 1913989 g18149 i0 75 2.99432892249527 176 44 99.8 0 529 2 17 192 HSC16174.1 zinc-binding dehydrogenase [Gammaproteobacteria bacterium] diamond 1584 278 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
6554877 6554877 PRJNA1059246_P_NODE_29246_length_407_cov_1.152695_g28621_i0 PRJNA1059246 29246 407 1.152695 4.69146865 Sphingomonas 13687 Bacteria Bacteria 251 2.36e-74   NR WP_209516686.1 28211 g28621 i0 100 1.99017199017199 135 0 99.5 0 405 1 688 822 WP_209516686.1 MULTISPECIES: strawberry notch-like NTP hydrolase domain-containing protein [Alphaproteobacteria] diamond 810 251 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria        
6555084 6555084 PRJNA1059246_P_NODE_46406_length_305_cov_2.112069_g45780_i0 PRJNA1059246 46406 305 2.112069 6.44181045 Ralstonia sp. 3PA37C1 54061 Bacteria Bacteria 206 2.14e-62   NR WP_137910641.1 2502217 g45780 i0 100 0.99344262295082 101 0 99.3 0 2 304 192 292 WP_137910641.1 restriction endonuclease subunit S [Ralstonia sp. 3PA37C10] diamond 303 206 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia sp. 3PA37C10
6555123 6555123 PRJNA1059246_P_NODE_49546_length_290_cov_2.055300_g48920_i0 PRJNA1059246 49546 290 2.0553 5.96037 Sphingomonas echinoides 59803 Bacteria Bacteria 187 5.429999999999998e-55   NR WP_010404391.1 59803 g48920 i0 90.6 0.993103448275862 96 9 99.3 0 2 289 224 319 WP_010404391.1 cytochrome c oxidase accessory protein CcoG [Sphingomonas echinoides] diamond 288 187 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas echinoides
6555185 6555185 PRJNA1059246_P_NODE_53866_length_277_cov_1.509804_g53240_i0 PRJNA1059246 53866 277 1.509804 4.18215708 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 174 3.43e-49   NR WP_211970077.1 2631580 g53240 i0 98.9 0.996389891696751 92 1 99.6 0 2 277 431 522 WP_211970077.1 MULTISPECIES: single-stranded-DNA-specific exonuclease RecJ [unclassified Bradyrhizobium] diamond 276 174 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
6555236 6555236 PRJNA1059246_P_NODE_57826_length_264_cov_1.549738_g57200_i0 PRJNA1059246 57826 264 1.549738 4.0913083200000004 Hyphomicrobiales 356 Bacteria Bacteria 117 1.99e-28   NR WP_027578949.1 196490 g57200 i0 61.4 2.96590909090909 88 33 98.9 1 2 262 2710 2797 WP_027578949.1 filamentous haemagglutinin family protein [Bradyrhizobium sp. Ai1a-2] diamond 783 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Ai1a-2
6555257 6555257 PRJNA1059246_P_NODE_60026_length_256_cov_1.666667_g59400_i0 PRJNA1059246 60026 256 1.666667 4.26666752 Pseudomonadota 1224 Bacteria Bacteria 99 7.260000000000001e-22   NR WP_327470404.1 1908224 g59400 i0 58.8 5.68359375 80 33 93.8 0 15 254 1130 1209 WP_327470404.1 tandem-95 repeat protein, partial [Sphingopyxis sp.] diamond 1455 99 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingopyxis Sphingopyxis sp.
6555280 6555280 PRJNA1059246_P_NODE_61706_length_251_cov_0.865169_g61080_i0 PRJNA1059246 61706 251 0.865169 2.17157419 Craurococcus 77583 Bacteria Bacteria 150 5.61e-40   NR WP_343898259.1 77585 g61080 i0 86.7 1.9840637450199201 83 11 99.2 0 250 2 47 129 WP_343898259.1 magnesium chelatase subunit H [Craurococcus roseus] diamond 498 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae Craurococcus Craurococcus roseus
6555347 6555347 PRJNA1059246_P_NODE_66586_length_247_cov_0.885057_g65960_i0 PRJNA1059246 66586 247 0.885057 2.18609079 Pseudomonadota bacterium 1977087 Bacteria Bacteria 124 3.63e-31   NR RZA09742.1 1977087 g65960 i0 82.7 0.910931174089069 75 6 91.1 1 226 2 5 72 RZA09742.1 MAG: sodium:solute symporter [Pseudomonadota bacterium] diamond 225 124 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
6555348 6555348 PRJNA1059246_P_NODE_66626_length_246_cov_2.514451_g66000_i0 PRJNA1059246 66626 246 2.514451 6.18554946 Burkholderiales bacterium 1891238 Bacteria Bacteria 111 2.1600000000000003e-27   NR MEI7445388.1 1891238 g66000 i0 65.8 3.79268292682927 76 26 92.7 0 2 229 207 282 MEI7445388.1 SDR family NAD(P)-dependent oxidoreductase [Burkholderiales bacterium] diamond 933 111 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
6555375 6555375 PRJNA1059246_P_NODE_68606_length_245_cov_0.895349_g67980_i0 PRJNA1059246 68606 245 0.895349 2.19360505 Alphaproteobacteria 28211 Bacteria Bacteria 145 2.1499999999999998e-38   NR WP_371421274.1 28211 g67980 i0 100 0.991836734693878 81 0 99.2 0 2 244 297 377 WP_371421274.1 MULTISPECIES: type I secretion system permease/ATPase [Alphaproteobacteria] diamond 243 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria        
6555405 6555405 PRJNA1059246_P_NODE_71586_length_242_cov_0.911243_g70960_i0 PRJNA1059246 71586 242 0.911243 2.20520806 Flaviflagellibacter deserti 2267266 Bacteria Bacteria 125 1.85e-32   NR WP_379769056.1 2267266 g70960 i0 81.3 0.991735537190083 80 15 99.2 0 3 242 92 171 WP_379769056.1 MFS transporter [Flaviflagellibacter deserti] diamond 240 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales   Flaviflagellibacter Flaviflagellibacter deserti
6555449 6555449 PRJNA1059246_P_NODE_9046_length_805_cov_6.678962_g8521_i0 PRJNA1059246 9046 805 6.678962 53.7656441 root 1 Root_unresolved Root_unresolved 313 3.7299999999999996e-104   NR KAB1729391.1 573 g8521 i0 66.4 4.43105590062112 235 79 87.6 0 745 41 17 251 KAB1729391.1 hypothetical protein FNE60_29875, partial [Klebsiella pneumoniae] diamond 3567 315 0.993650793650794 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
7389259 7389259 PRJNA1059246_P_NODE_55406_length_272_cov_1.547739_g54780_i0 PRJNA1059246 55406 272 1.547739 4.20985008 Thalassobaculum sp. 2022740 Bacteria Bacteria 80.5 2.51e-15   NR WP_350194666.1 2022740 g54780 i0 50 0.948529411764706 86 43 94.9 0 11 268 292 377 WP_350194666.1 adenylate/guanylate cyclase domain-containing protein, partial [Thalassobaculum sp.] diamond 258 80.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Thalassobaculaceae Thalassobaculum Thalassobaculum sp.
7389297 7389297 PRJNA1059246_P_NODE_65546_length_248_cov_0.868571_g64920_i0 PRJNA1059246 65546 248 0.868571 2.15405608 Sphingomonas 13687 Bacteria Bacteria 150 1.18e-44   NR MCP4028892.1 28214 g64920 i0 97.5 1.8991935483871 80 0 96.8 1 248 9 57 134 MCP4028892.1 glutathione S-transferase [Sphingomonas sp.] diamond 471 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
7829381 7829381 PRJNA1059246_P_NODE_18127_length_540_cov_1.638116_g17515_i0 PRJNA1059246 18127 540 1.638116 8.8458264 Rhizorhabdus wittichii 160791 Bacteria Bacteria 252 6.85e-77   NR WP_208631677.1 160791 g17515 i0 70.6 1 180 53 100 0 540 1 431 610 WP_208631677.1 DNA cytosine methyltransferase [Rhizorhabdus wittichii] diamond 540 252 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Rhizorhabdus Rhizorhabdus wittichii
7829485 7829485 PRJNA1059246_P_NODE_24667_length_451_cov_1.261905_g24043_i0 PRJNA1059246 24667 451 1.261905 5.69119155 Pseudomonadota bacterium 1977087 Bacteria Bacteria 229 5.81e-71   NR MES2987670.1 1977087 g24043 i0 81.3 0.891352549889135 134 25 89.1 0 48 449 1 134 MES2987670.1 phage minor head protein [Pseudomonadota bacterium] diamond 402 229 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
7829667 7829667 PRJNA1059246_P_NODE_38987_length_342_cov_1.431227_g38361_i0 PRJNA1059246 38987 342 1.431227 4.89479634 Sphingomonadaceae 41297 Bacteria Bacteria 207 2.12e-63   NR WP_070156706.1 41297 g38361 i0 100 0.93859649122807 107 0 93.9 0 340 20 301 407 WP_070156706.1 MULTISPECIES: cation:proton antiporter [Sphingomonadaceae] diamond 321 207 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
7829802 7829802 PRJNA1059246_P_NODE_50347_length_288_cov_1.390698_g49721_i0 PRJNA1059246 50347 288 1.390698 4.00521024 Acetobacteraceae 433 Bacteria Bacteria 157 6.499999999999998e-44   NR WP_077807525.1 320497 g49721 i0 76.8 4.98958333333333 95 21 97.9 1 2 283 281 375 WP_077807525.1 ABC transporter substrate-binding protein [Neoasaia chiangmaiensis] diamond 1437 157 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae Neoasaia Neoasaia chiangmaiensis
7829866 7829866 PRJNA1059246_P_NODE_56567_length_268_cov_2.666667_g55941_i0 PRJNA1059246 56567 268 2.666667 7.14666756 Bosea sp. R865 3101710 Bacteria Bacteria 163 3.08e-46   NR WP_376989472.1 3101710 g55941 i0 96.6 0.985074626865672 88 3 98.5 0 266 3 53 140 WP_376989472.1 TRAP transporter large permease [Bosea sp. R86505] diamond 264 163 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. R86505
7829925 7829925 PRJNA1059246_P_NODE_62307_length_250_cov_2.502825_g61681_i0 PRJNA1059246 62307 250 2.502825 6.2570625 Alphaproteobacteria 28211 Bacteria Bacteria 112 4.73e-28   NR MDT7950073.1 1909293 g61681 i0 72 5.904 82 23 98.4 0 3 248 101 182 MDT7950073.1 branched-chain amino acid ABC transporter permease [Acetobacteraceae bacterium] diamond 1476 113 0.991150442477876 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Acetobacteraceae   Acetobacteraceae bacterium
7829959 7829959 PRJNA1059246_P_NODE_65387_length_248_cov_0.880000_g64761_i0 PRJNA1059246 65387 248 0.88 2.1824 Pseudomonas fluvialis 1793966 Bacteria Bacteria 144 2.14e-40   NR WP_184682617.1 1793966 g64761 i0 92.7 0.991935483870968 82 6 99.2 0 2 247 163 244 WP_184682617.1 putative 2-dehydropantoate 2-reductase [Pseudomonas fluvialis] diamond 246 144 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas fluvialis
7829963 7829963 PRJNA1059246_P_NODE_65607_length_247_cov_1.770115_g64981_i0 PRJNA1059246 65607 247 1.770115 4.37218405 Stellaceae bacterium 2910174 Bacteria Bacteria 120 1.19e-29   NR HEX5318397.1 2910174 g64981 i0 70.4 12.8259109311741 81 24 98.4 0 5 247 452 532 HEX5318397.1 M3 family metallopeptidase [Stellaceae bacterium] diamond 3168 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Stellaceae   Stellaceae bacterium
7830030 7830030 PRJNA1059246_P_NODE_70887_length_242_cov_1.532544_g70261_i0 PRJNA1059246 70887 242 1.532544 3.70875648 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 163 6.229999999999999e-48   NR WP_211966993.1 2631580 g70261 i0 100 0.991735537190083 80 0 99.2 0 3 242 210 289 WP_211966993.1 MULTISPECIES: LysR family transcriptional regulator [unclassified Bradyrhizobium] diamond 240 163 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
8664560 8664560 PRJNA1059246_P_NODE_16907_length_563_cov_1.934694_g16296_i0 PRJNA1059246 16907 563 1.934694 10.89232722 Ralstonia pickettii 329 Bacteria Bacteria 363 2.3e-125   NR MBB0179453.1 329 g16296 i0 100 0.964476021314387 181 0 96.4 0 3 545 78 258 MBB0179453.1 phosphate regulon transcriptional regulatory protein PhoB [Ralstonia pickettii] diamond 543 363 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia pickettii
8664769 8664769 PRJNA1059246_P_NODE_9967_length_763_cov_2.314493_g9429_i0 PRJNA1059246 9967 763 2.314493 17.65958159 Sphingomonadaceae 41297 Bacteria Bacteria 310 1.3399999999999999e-104   NR WP_223806530.1 41297 g9429 i0 100 0.589777195281782 150 0 59 0 761 312 28 177 WP_223806530.1 MULTISPECIES: styrene-oxide isomerase StyC [Sphingomonadaceae] diamond 450 310 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae    
9104388 9104388 PRJNA1059246_P_NODE_1688_length_1865_cov_15.454241_g1513_i0 PRJNA1059246 1688 1865 15.454241 288.22159465 Cupriavidus metallidurans 119219 Bacteria Bacteria 563 3.489999999999999e-197   NR WP_062794423.1 119219 g1513 i0 98.9 0.434316353887399 270 3 43.4 0 624 1433 1 270 WP_062794423.1 replication initiation factor domain-containing protein, partial [Cupriavidus metallidurans] diamond 810 563 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus metallidurans
9104515 9104515 PRJNA1059246_P_NODE_25748_length_439_cov_1.543716_g25123_i0 PRJNA1059246 25748 439 1.543716 6.77691324 root 1 Root_unresolved Root_unresolved 218 8.48e-65   NR MBY0224216.1 82 g25123 i0 74 622.19589977221 146 37 99.8 1 1 438 141 285 MBY0224216.1 molecular chaperone DnaK [Hyphomicrobium sp.] diamond 273144 219 0.995433789954338 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
9104628 9104628 PRJNA1059246_P_NODE_34848_length_366_cov_1.313993_g34222_i0 PRJNA1059246 34848 366 1.313993 4.80921438 Ralstonia 48736 Bacteria Bacteria 214 2.63e-68   NR WP_182611487.1 48736 g34222 i0 100 0.909836065573771 111 0 91 0 1 333 111 221 WP_182611487.1 MULTISPECIES: molybdate ABC transporter permease subunit [Ralstonia] diamond 333 214 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia  
9104683 9104683 PRJNA1059246_P_NODE_39968_length_337_cov_1.094697_g39342_i0 PRJNA1059246 39968 337 1.094697 3.68912889 Novosphingobium sp. Fuku2-ISO-5 1874826 Bacteria Bacteria 60.5 4.68e-8   NR WP_067745397.1 1739114 g39342 i0 46.3 5.1186943620178 54 29 48.1 0 335 174 228 281 WP_067745397.1 pseudouridine synthase [Novosphingobium sp. Fuku2-ISO-50] diamond 1725 60.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium sp. Fuku2-ISO-50
9104872 9104872 PRJNA1059246_P_NODE_55748_length_271_cov_1.550505_g55122_i0 PRJNA1059246 55748 271 1.550505 4.20186855 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 173 1.62e-51   NR WP_211964362.1 2631580 g55122 i0 98.9 0.996309963099631 90 1 99.6 0 2 271 166 255 WP_211964362.1 MULTISPECIES: LysR family transcriptional regulator [unclassified Bradyrhizobium] diamond 270 173 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
9104968 9104968 PRJNA1059246_P_NODE_64108_length_249_cov_0.875000_g63482_i0 PRJNA1059246 64108 249 0.875 2.17875 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 136 1.46e-38   NR WP_200386575.1 382777 g63482 i0 81.5 10.8072289156626 81 14 96.4 1 240 1 70 150 WP_200386575.1 peptidylprolyl isomerase [Thiocapsa imhoffii] diamond 2691 136 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae Thiocapsa Thiocapsa imhoffii

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;