RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1059246" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1059246 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29308986 29308986 PRJNA1059246_P_NODE_26669_length_430_cov_1.282913_g26044_i0 PRJNA1059246 26669 430 1.282913 5.5165259 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 50.4 4.34e-4   NR QQS70163.1 2026720 g26044 i0 60.8 1.47209302325581 51 14 35.6 2 189 341 260 304 QQS70163.1 MAG: SHOCT domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 633 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29561553 29561553 PRJNA1059246_P_NODE_54530_length_275_cov_1.524752_g53904_i0 PRJNA1059246 54530 275 1.524752 4.193068 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 135 3.65e-38   NR MCA9328072.1 2026720 g53904 i0 71.8 0.927272727272727 85 24 92.7 0 273 19 32 116 MCA9328072.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 255 135 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30153357 30153357 PRJNA1059246_P_NODE_55532_length_272_cov_1.195980_g54906_i0 PRJNA1059246 55532 272 1.19598 3.2530656 Bacteria 2 Bacteria Bacteria 109 1.19e-25   NR MBC7764264.1 2026720 g54906 i0 64.4 9.92647058823529 90 32 99.3 0 3 272 74 163 MBC7764264.1 cation:proton antiporter [Candidatus Saccharibacteria bacterium] diamond 2700 109 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32280158 32280158 PRJNA1059246_P_NODE_17579_length_550_cov_0.974843_g16968_i0 PRJNA1059246 17579 550 0.974843 5.3616365 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 109 6.6999999999999985e-25   NR MCA9334040.1 2026720 g16968 i0 52.3 0.583636363636364 107 51 58.4 0 228 548 56 162 MCA9334040.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Saccharibacteria bacterium] diamond 321 109 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;