RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1057075" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1057075 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27667358 27667358 PRJNA1057075_S_NODE_9584_length_160_cov_4.090090_g9485_i0 PRJNA1057075 9584 160 4.09009 6.544144 Trichonephila clavipes 2585209 Arthropoda Arthropoda 44.7 0.00113   NR GFU75740.1 2585209 g9485 i0 70.4 0.50625 27 8 50.6 0 81 1 110 136 GFU75740.1 hypothetical protein TNCV_1652001 [Trichonephila clavipes] diamond 81 44.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavipes
28709276 28709276 PRJNA1057075_S_NODE_3767_length_229_cov_6.566667_g3668_i0 PRJNA1057075 3767 229 6.566667 15.03766743 Macrosiphum euphorbiae 13131 Arthropoda Arthropoda 43.1 0.0173   NR CAI6376859.1 13131 g3668 i0 41.5 1.66375545851528 53 25 61.6 1 229 89 135 187 CAI6376859.1 unnamed protein product [Macrosiphum euphorbiae] diamond 381 43.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Macrosiphum Macrosiphum euphorbiae
32784973 32784973 PRJNA1057075_S_NODE_3440_length_237_cov_1.095745_g3341_i0 PRJNA1057075 3440 237 1.095745 2.59691565 Penaeus vannamei 6689 Arthropoda Arthropoda 43.5 0.0187   NR ROT68233.1 6689 g3341 i0 47.6 0.531645569620253 42 22 53.2 0 7 132 386 427 ROT68233.1 hypothetical protein C7M84_013644 [Penaeus vannamei] diamond 126 43.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Penaeidae Penaeus Penaeus vannamei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;