RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1050291" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1050291 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11654632 11654632 PRJNA1050291_P_NODE_2950_length_1273_cov_4.664167_g2113_i0 PRJNA1050291 2950 1273 4.664167 59.37484591 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 600 5.92e-212   NR PRP82528.1 1890364 g2113 i0 68 0.994501178318932 422 133 99.2 2 1272 10 17 437 PRP82528.1 L-lysine 6-transaminase [Planoprotostelium fungivorum] diamond 1266 600 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
14204487 14204487 PRJNA1050291_P_NODE_10672_length_366_cov_2.262799_g9781_i0 PRJNA1050291 10672 366 2.262799 8.28184434 Polysphondylium violaceum 133409 Evosea other_Eukaryota 120 2.43e-30   NR KAF2073773.1 133409 g9781 i0 45.8 0.983606557377049 120 64 98.4 1 7 366 103 221 KAF2073773.1 hypothetical protein CYY_004907 [Polysphondylium violaceum] diamond 360 120 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27153179 27153179 PRJNA1050291_P_NODE_10402_length_374_cov_3.897010_g9511_i0 PRJNA1050291 10402 374 3.89701 14.5748174 Variosea 2605334 Evosea other_Eukaryota 50.1 5.69e-5   NR KAH3745596.1 1580589 g9511 i0 34.7 1.26737967914438 75 47 60.2 1 336 112 24 96 KAH3745596.1 hypothetical protein Pelo_12998 [Pelomyxa schiedti] diamond 474 50.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27699095 27699095 PRJNA1050291_P_NODE_3864_length_899_cov_2.946731_g2989_i0 PRJNA1050291 3864 899 2.946731 26.49111169 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 72.4 4.32e-10   NR KAH3767768.1 1580589 g2989 i0 41 0.760845383759733 134 65 40 2 415 56 274 407 KAH3767768.1 hypothetical protein Pelo_292 [Pelomyxa schiedti] diamond 684 72.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28551405 28551405 PRJNA1050291_P_NODE_11407_length_348_cov_3.036364_g10516_i0 PRJNA1050291 11407 348 3.036364 10.56654672 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 154 1.77e-44   NR PRP88069.1 1890364 g10516 i0 74 0.896551724137931 104 26 88.8 1 310 2 3 106 PRP88069.1 Mps1 binder-like protein [Planoprotostelium fungivorum] diamond 312 154 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29426982 29426982 PRJNA1050291_P_NODE_5829_length_607_cov_8.449438_g4939_i0 PRJNA1050291 5829 607 8.449438 51.28808866 Dictyosteliales 2058949 Evosea other_Eukaryota 218 2.51e-66   NR KAF2072164.1 133409 g4939 i0 61.1 5.37726523887974 180 70 89 0 32 571 207 386 KAF2072164.1 hypothetical protein CYY_006523 [Polysphondylium violaceum] diamond 3264 218 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30193192 30193192 PRJNA1050291_P_NODE_15112_length_283_cov_3.647619_g14221_i0 PRJNA1050291 15112 283 3.647619 10.32276177 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 57.4 1.29e-8   NR KAH3762696.1 1580589 g14221 i0 56.8 0.46643109540636 44 19 46.6 0 2 133 23 66 KAH3762696.1 hypothetical protein Pelo_5466 [Pelomyxa schiedti] diamond 132 57.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30224855 30224855 PRJNA1050291_P_NODE_8092_length_458_cov_2.290909_g7201_i0 PRJNA1050291 8092 458 2.290909 10.49236322 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 66.6 1.46e-9   NR KYQ92379.1 361077 g7201 i0 30.2 1.86681222707424 139 92 90.4 4 39 452 251 385 KYQ92379.1 hypothetical protein DLAC_06347 [Tieghemostelium lacteum] diamond 855 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
31741935 31741935 PRJNA1050291_P_NODE_8977_length_421_cov_1.787356_g8086_i0 PRJNA1050291 8977 421 1.787356 7.52476876 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 105 4.13e-23   NR KAH3732091.1 1580589 g8086 i0 50.5 0.691211401425178 97 48 69.1 0 419 129 532 628 KAH3732091.1 calcium-activated BK potassium channel [Pelomyxa schiedti] diamond 291 105 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;