RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1050291" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA1050291 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28803607 28803607 PRJNA1050291_P_NODE_20128_length_245_cov_1.796512_g19237_i0 PRJNA1050291 20128 245 1.796512 4.4014544 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 120 2.36e-29   NR MBX9723200.1 2364082 g19237 i0 68.4 0.96734693877551 79 25 96.7 0 238 2 402 480 MBX9723200.1 glycosyltransferase [Candidatus Obscuribacterales bacterium] diamond 237 120 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29909102 29909102 PRJNA1050291_P_NODE_20031_length_246_cov_0.901734_g19140_i0 PRJNA1050291 20031 246 0.901734 2.21826564 Candidatus Sericytochromatia bacterium 2762020 Bacteria Bacteria 139 1.22e-36   NR HEY9890525.1 2762020 g19140 i0 86.4 2.96341463414634 81 11 98.8 0 245 3 141 221 HEY9890525.1 glycosyltransferase [Candidatus Sericytochromatia bacterium] diamond 729 139 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati   Candidatus Sericytochromatia       Candidatus Sericytochromatia bacterium
32398476 32398476 PRJNA1050291_P_NODE_22899_length_198_cov_4.024000_g22008_i0 PRJNA1050291 22899 198 4.024 7.96752 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 53.5 2.56e-6   NR WP_075899142.1 207920 g22008 i0 46 2.34848484848485 50 26 74.2 1 153 7 133 182 WP_075899142.1 serine/threonine-protein kinase [Moorena bouillonii] diamond 465 53.9 0.992578849721707 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Moorena Moorena bouillonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;