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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1047749" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047749 · 17 ✖

analysis 1

  • diamond · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14203924 14203924 PRJNA1047749_P_NODE_38612_length_253_cov_6.633333_g38345_i0 PRJNA1047749 38612 253 6.633333 16.78233249 Rariglobus sp. 2706526 Bacteria Bacteria 140 5.21e-39   NR MET0263073.1 2706526 g38345 i0 90.4 0.984189723320158 83 8 98.4 0 251 3 24 106 MET0263073.1 flagellar hook-basal body complex protein [Rariglobus sp.] diamond 249 140 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Rariglobus Rariglobus sp.
21412102 21412102 PRJNA1047749_P_NODE_19737_length_312_cov_3.016736_g19470_i0 PRJNA1047749 19737 312 3.016736 9.41221632 Rubellicoccus peritrichatus 3080537 Bacteria Bacteria 89.7 2.53e-18   NR WP_317835588.1 3080537 g19470 i0 76 0.480769230769231 50 12 48.1 0 310 161 264 313 WP_317835588.1 thiamine pyrophosphate-binding protein [Rubellicoccus peritrichatus] diamond 150 89.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Cerasicoccaceae Rubellicoccus Rubellicoccus peritrichatus
22686840 22686840 PRJNA1047749_P_NODE_14198_length_328_cov_5.015686_g13933_i0 PRJNA1047749 14198 328 5.015686 16.45145008 Pseudomonadati 3379134 Bacteria Bacteria 202 4.79e-60   NR MBL4641424.1 2026801 g13933 i0 99.1 1.9390243902439 106 1 97 0 3 320 294 399 MBL4641424.1 enoyl-CoA hydratase/isomerase family protein [Verrucomicrobiales bacterium] diamond 636 202 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
26900719 26900719 PRJNA1047749_P_NODE_17641_length_312_cov_4.497908_g17374_i0 PRJNA1047749 17641 312 4.497908 14.03347296 Pseudomonadati 3379134 Bacteria Bacteria 57.8 2.62e-7   NR PYI77973.1 2026799 g17374 i0 63.6 2.61538461538462 44 16 42.3 0 139 8 67 110 PYI77973.1 MAG: hypothetical protein DMF04_04775 [Verrucomicrobiota bacterium] diamond 816 57.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27699069 27699069 PRJNA1047749_P_NODE_25524_length_300_cov_4.325991_g25257_i0 PRJNA1047749 25524 300 4.325991 12.977973 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 58.5 6.81e-8   NR RYD36633.1 2026800 g25257 i0 56 1 50 21 50 1 151 2 131 179 RYD36633.1 MAG: DUF4142 domain-containing protein [Verrucomicrobiaceae bacterium] diamond 300 58.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28488152 28488152 PRJNA1047749_P_NODE_19447_length_312_cov_3.179916_g19180_i0 PRJNA1047749 19447 312 3.179916 9.92133792 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 105 1.3299999999999999e-24   NR MDD5200401.1 2832348 g19180 i0 96 1.44230769230769 50 2 48.1 0 311 162 194 243 MDD5200401.1 aldo/keto reductase [Terrimicrobiaceae bacterium] diamond 450 105 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium
29245847 29245847 PRJNA1047749_P_NODE_15849_length_312_cov_8.707113_g15582_i0 PRJNA1047749 15849 312 8.707113 27.16619256 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 58.5 2.48e-7   NR MBI5396394.1 2026799 g15582 i0 66 2.21153846153846 47 16 45.2 0 10 150 525 571 MBI5396394.1 PAS domain S-box protein [Verrucomicrobiota bacterium] diamond 690 58.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29719185 29719185 PRJNA1047749_P_NODE_17110_length_312_cov_5.096234_g16843_i0 PRJNA1047749 17110 312 5.096234 15.90025008 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 49.3 3.93e-4   NR MEN9282925.1 2026799 g16843 i0 46 0.480769230769231 50 27 48.1 0 150 1 1 50 MEN9282925.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 150 49.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30098361 30098361 PRJNA1047749_P_NODE_23112_length_301_cov_6.995614_g22845_i0 PRJNA1047749 23112 301 6.995614 21.05679814 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 80.9 2.22e-15   NR MEM9160859.1 2026799 g22845 i0 81.5 2.69102990033223 54 10 53.8 0 164 3 254 307 MEM9160859.1 toxic anion resistance protein [Verrucomicrobiota bacterium] diamond 810 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30185093 30185093 PRJNA1047749_P_NODE_34212_length_270_cov_2.817259_g33945_i0 PRJNA1047749 34212 270 2.817259 7.6065993 Pseudomonadati 3379134 Bacteria Bacteria 138 7.45e-40   NR MBS0637517.1 2026799 g33945 i0 74.4 2.86666666666667 86 22 95.6 0 259 2 48 133 MBS0637517.1 NUDIX domain-containing protein [Verrucomicrobiota bacterium] diamond 774 138 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30635443 30635443 PRJNA1047749_P_NODE_47593_length_224_cov_5.026490_g47326_i0 PRJNA1047749 47593 224 5.02649 11.2593376 Opitutaceae bacterium 2006848 Bacteria Bacteria 51.6 4.3e-6   NR HTB79598.1 2006848 g47326 i0 38.3 1.40625 60 33 75 2 1 168 65 124 HTB79598.1 hypothetical protein [Opitutaceae bacterium] diamond 315 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30793498 30793498 PRJNA1047749_P_NODE_16514_length_312_cov_6.112971_g16247_i0 PRJNA1047749 16514 312 6.112971 19.07246952 Opitutaceae bacterium 2006848 Bacteria Bacteria 62.8 1.63e-9   NR MDD2766032.1 2006848 g16247 i0 68.3 0.394230769230769 41 13 39.4 0 151 29 19 59 MDD2766032.1 GNAT family N-acetyltransferase [Opitutaceae bacterium] diamond 123 62.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31805236 31805236 PRJNA1047749_P_NODE_18217_length_312_cov_3.979079_g17950_i0 PRJNA1047749 18217 312 3.979079 12.41472648 Opitutia bacterium 2026771 Bacteria Bacteria 155 1.58e-43   NR MEI6108410.1 2026771 g17950 i0 85.3 1.81730769230769 95 10 87.5 1 277 5 268 362 MEI6108410.1 IS4 family transposase [Opitutia bacterium] diamond 567 155 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
32501635 32501635 PRJNA1047749_P_NODE_4819_length_542_cov_5.746269_g4570_i0 PRJNA1047749 4819 542 5.746269 31.14477798 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 75.9 2.6e-12   NR MCX6937431.1 2026799 g4570 i0 52.2 0.498154981549816 90 37 48.2 4 267 527 94 180 MCX6937431.1 autotransporter-associated beta strand repeat-containing protein [Verrucomicrobiota bacterium] diamond 270 75.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32658832 32658832 PRJNA1047749_P_NODE_47160_length_227_cov_2.720779_g46893_i0 PRJNA1047749 47160 227 2.720779 6.17616833 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 90.9 3.42e-19   NR MEQ1852628.1 2811408 g46893 i0 54.7 0.991189427312775 75 34 99.1 0 2 226 449 523 MEQ1852628.1 hypothetical protein [Chthoniobacteraceae bacterium] diamond 225 90.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
32722145 32722145 PRJNA1047749_P_NODE_27740_length_295_cov_6.144144_g27473_i0 PRJNA1047749 27740 295 6.144144 18.1252248 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 90.1 1.49e-18   NR TAG27210.1 2026799 g27473 i0 85.7 0.498305084745763 49 7 49.8 0 147 293 117 165 TAG27210.1 MAG: VCBS repeat-containing protein [Verrucomicrobiota bacterium] diamond 147 90.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32745592 32745592 PRJNA1047749_P_NODE_21220_length_311_cov_4.554622_g20953_i0 PRJNA1047749 21220 311 4.554622 14.16487442 Chthoniobacter 295577 Bacteria Bacteria 47 0.00227   NR MEA3209038.1 2510640 g20953 i0 59.5 0.627009646302251 37 15 35.7 0 250 140 101 137 MEA3209038.1 hypothetical protein [Chthoniobacter sp.] diamond 195 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Chthoniobacter Chthoniobacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;