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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA1047749" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047749 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26877346 26877346 PRJNA1047749_P_NODE_49441_length_211_cov_8.275362_g49174_i0 PRJNA1047749 49441 211 8.275362 17.46101382 Camelus dromedarius 9838 Chordata Chordata 42.4 0.0352   NR KAB1257153.1 9838 g49174 i0 59.1 0.625592417061611 44 17 62.6 1 7 138 770 812 KAB1257153.1 hypothetical protein Cadr_000026359 [Camelus dromedarius] diamond 132 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
27351617 27351617 PRJNA1047749_P_NODE_41703_length_245_cov_3.372093_g41436_i0 PRJNA1047749 41703 245 3.372093 8.26162785 Callorhinus ursinus 34884 Chordata Chordata 43.1 0.0283   NR XP_025742367.1 34884 g41436 i0 49 0.624489795918367 51 16 62.4 2 232 80 864 904 XP_025742367.1 molybdenum cofactor sulfurase isoform X1 [Callorhinus ursinus] diamond 153 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Otariidae Callorhinus Callorhinus ursinus
27793559 27793559 PRJNA1047749_P_NODE_50324_length_206_cov_5.458647_g50057_i0 PRJNA1047749 50324 206 5.458647 11.24481282 Muntiacus reevesi 9886 Chordata Chordata 42 0.0434   NR XP_065760915.1 9886 g50057 i0 55.6 0.786407766990291 54 17 78.6 2 189 28 516 562 XP_065760915.1 collagen alpha-1(I) chain-like [Muntiacus reevesi] diamond 162 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
28045999 28045999 PRJNA1047749_P_NODE_47205_length_227_cov_2.253247_g46938_i0 PRJNA1047749 47205 227 2.253247 5.11487069 Bos mutus 72004 Chordata Chordata 75.9 3.33e-16   NR MXQ86735.1 72004 g46938 i0 76.6 0.621145374449339 47 9 59.5 1 199 65 1 47 MXQ86735.1 hypothetical protein [Bos mutus] diamond 141 75.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
28046002 28046002 PRJNA1047749_P_NODE_51965_length_197_cov_5.798387_g51698_i0 PRJNA1047749 51965 197 5.798387 11.42282239 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 44.3 0.00487   NR CAI9158234.1 3082113 g51698 i0 45.8 0.898477157360406 59 32 89.8 0 20 196 39 97 CAI9158234.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 177 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
28172262 28172262 PRJNA1047749_P_NODE_42066_length_244_cov_3.888889_g41799_i0 PRJNA1047749 42066 244 3.888889 9.48888916 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 53.9 1.45e-6   NR CAI9166711.1 3082113 g41799 i0 45.2 0.762295081967213 62 33 75 1 198 16 76 137 CAI9166711.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 186 53.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
28172263 28172263 PRJNA1047749_P_NODE_48766_length_216_cov_4.167832_g48499_i0 PRJNA1047749 48766 216 4.167832 9.00251712 Equus caballus 9796 Chordata Chordata 55.5 8.76e-7   NR XP_070121990.1 9796 g48499 i0 71.4 0.486111111111111 35 10 48.6 0 13 117 626 660 XP_070121990.1 solute carrier family 23 member 1 isoform X3 [Equus caballus] diamond 105 55.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus caballus
28203686 28203686 PRJNA1047749_P_NODE_30626_length_285_cov_2.278302_g30359_i0 PRJNA1047749 30626 285 2.278302 6.4931607 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 67.8 3.48e-12   NR CAI9181129.1 3082113 g30359 i0 45.7 0.852631578947368 81 33 80 3 260 33 8 82 CAI9181129.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 243 67.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
28361671 28361671 PRJNA1047749_P_NODE_38546_length_254_cov_2.033149_g38279_i0 PRJNA1047749 38546 254 2.033149 5.16419846 Rhinolophus ferrumequinum 59479 Chordata Chordata 60.8 1.03e-8   NR KAF6327521.1 59479 g38279 i0 60.3 0.68503937007874 58 22 67.3 1 63 233 22 79 KAF6327521.1 hypothetical protein mRhiFer1_008242 [Rhinolophus ferrumequinum] diamond 174 60.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Rhinolophidae Rhinolophus Rhinolophus ferrumequinum
28488163 28488163 PRJNA1047749_P_NODE_40447_length_248_cov_8.988571_g40180_i0 PRJNA1047749 40447 248 8.988571 22.29165608 Lynx canadensis 61383 Chordata Chordata 43.5 0.0176   NR XP_030190857.1 61383 g40180 i0 46.3 0.653225806451613 54 26 61.7 1 49 201 16 69 XP_030190857.1 uncharacterized protein LOC115527403 [Lynx canadensis] diamond 162 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Lynx Lynx canadensis
28835372 28835372 PRJNA1047749_P_NODE_37448_length_258_cov_1.335135_g37181_i0 PRJNA1047749 37448 258 1.335135 3.4446483 Cricetulus griseus 10029 Chordata Chordata 45.8 5.85e-4   NR ERE82891.1 10029 g37181 i0 40.7 1.18604651162791 54 32 62.8 0 58 219 20 73 ERE82891.1 hypothetical protein H671_2g7114 [Cricetulus griseus] diamond 306 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Cricetulus Cricetulus griseus
28898385 28898385 PRJNA1047749_P_NODE_35668_length_264_cov_4.099476_g35401_i0 PRJNA1047749 35668 264 4.099476 10.82261664 Ovis ammon polii x Ovis aries 2918886 Chordata Chordata 128 2.9199999999999996e-35   NR KAI4555104.1 2918886 g35401 i0 86.4 0.920454545454545 81 11 92 0 12 254 98 178 KAI4555104.1 hypothetical protein MJT46_015490 [Ovis ammon polii x Ovis aries] diamond 243 128 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon polii x Ovis aries
29182861 29182861 PRJNA1047749_P_NODE_20049_length_312_cov_2.874477_g19782_i0 PRJNA1047749 20049 312 2.874477 8.96836824 Bos taurus 9913 Chordata Chordata 73.2 1.84e-12   NR DAA20997.1 9913 g19782 i0 97 0.317307692307692 33 1 31.7 0 52 150 26 58 DAA20997.1 TPA: calmodulin regulated spectrin-associated protein 1-like 1 [Bos taurus] diamond 99 73.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
29750795 29750795 PRJNA1047749_P_NODE_49771_length_209_cov_8.860294_g49504_i0 PRJNA1047749 49771 209 8.860294 18.51801446 Protopterus annectens 7888 Chordata Chordata 47 7.52e-4   NR XP_043925398.1 7888 g49504 i0 51.2 0.588516746411483 41 20 58.9 0 194 72 54 94 XP_043925398.1 sequestosome-1 [Protopterus annectens] diamond 123 47 1 Eukaryota Opisthokonta Metazoa Chordata   Ceratodontiformes Protopteridae Protopterus Protopterus annectens
29972096 29972096 PRJNA1047749_P_NODE_42191_length_244_cov_2.251462_g41924_i0 PRJNA1047749 42191 244 2.251462 5.49356728 Molossus molossus 27622 Chordata Chordata 49.3 1.36e-4   NR KAF6500942.1 27622 g41924 i0 37.2 0.959016393442623 78 43 88.5 2 239 24 49 126 KAF6500942.1 hypothetical protein HJG59_007965 [Molossus molossus] diamond 234 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Molossidae Molossus Molossus molossus
30193176 30193176 PRJNA1047749_P_NODE_42972_length_242_cov_1.769231_g42705_i0 PRJNA1047749 42972 242 1.769231 4.28153902 Lynx pardinus 191816 Chordata Chordata 47.4 4.57e-4   NR VFV23952.1 191816 g42705 i0 50 0.694214876033058 56 19 63.2 2 233 81 5 56 VFV23952.1 Hypothetical predicted protein, partial [Lynx pardinus] diamond 168 47.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Lynx Lynx pardinus
30224833 30224833 PRJNA1047749_P_NODE_51732_length_198_cov_7.736000_g51465_i0 PRJNA1047749 51732 198 7.736 15.31728 Eschrichtius robustus 9764 Chordata Chordata 66.2 1.04e-10   NR KAJ8777472.1 9764 g51465 i0 65.5 0.878787878787879 58 11 87.9 1 20 193 121 169 KAJ8777472.1 hypothetical protein J1605_014475 [Eschrichtius robustus] diamond 174 66.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
30288447 30288447 PRJNA1047749_P_NODE_39932_length_250_cov_1.711864_g39665_i0 PRJNA1047749 39932 250 1.711864 4.27966 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 52 8.94e-7   NR CAI9167132.1 3082113 g39665 i0 69.2 0.468 39 12 46.8 0 99 215 7 45 CAI9167132.1 unnamed protein product, partial [Rangifer tarandus platyrhynchus] diamond 117 52 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
30351823 30351823 PRJNA1047749_P_NODE_38712_length_253_cov_3.455556_g38445_i0 PRJNA1047749 38712 253 3.455556 8.74255668 Bos mutus 72004 Chordata Chordata 46.2 0.00219   NR MXQ90284.1 72004 g38445 i0 100 0.237154150197628 20 0 23.7 0 250 191 171 190 MXQ90284.1 hypothetical protein [Bos mutus] diamond 60 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
30825152 30825152 PRJNA1047749_P_NODE_51974_length_197_cov_5.548387_g51707_i0 PRJNA1047749 51974 197 5.548387 10.93032239 Camelus dromedarius 9838 Chordata Chordata 42.4 0.027   NR XP_064347316.1 9838 g51707 i0 52.4 0.639593908629442 42 20 64 0 8 133 38 79 XP_064347316.1 LOW QUALITY PROTEIN: large ribosomal subunit protein uL1-like [Camelus dromedarius] diamond 126 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
30880239 30880239 PRJNA1047749_P_NODE_37174_length_259_cov_1.258065_g36907_i0 PRJNA1047749 37174 259 1.258065 3.25838835 Mammalia 40674 Chordata Chordata 50.1 1.23e-4   NR XP_037654950.1 27675 g36907 i0 42.6 2.11969111969112 61 33 70.7 1 28 210 651 709 XP_037654950.1 LOW QUALITY PROTEIN: uncharacterized protein LOC119506119, partial [Choloepus didactylus] diamond 549 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Pilosa Megalonychidae Choloepus Choloepus didactylus
30983349 30983349 PRJNA1047749_P_NODE_49274_length_212_cov_8.115108_g49007_i0 PRJNA1047749 49274 212 8.115108 17.20402896 Sousa chinensis 103600 Chordata Chordata 52.8 7.15e-6   NR TEA28625.1 103600 g49007 i0 83.3 0.424528301886792 30 5 42.5 0 211 122 471 500 TEA28625.1 hypothetical protein DBR06_SOUSAS31110025 [Sousa chinensis] diamond 90 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sousa Sousa chinensis
31046646 31046646 PRJNA1047749_P_NODE_45835_length_231_cov_5.639241_g45568_i0 PRJNA1047749 45835 231 5.639241 13.02664671 Mus musculus 10090 Chordata Chordata 152 6.27e-42   NR NP_001165572.1 10090 g45568 i0 100 0.974025974025974 75 0 97.4 0 7 231 202 276 NP_001165572.1 ribonuclease inhibitor isoform b [Mus musculus] diamond 225 152 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
31078112 31078112 PRJNA1047749_P_NODE_20815_length_312_cov_2.405858_g20548_i0 PRJNA1047749 20815 312 2.405858 7.50627696 Capra hircus 9925 Chordata Chordata 50.4 1.45e-4   NR XDB59583.1 9925 g20548 i0 59.2 0.471153846153846 49 20 47.1 0 149 3 95 143 XDB59583.1 hypothetical protein ABFV05_013199 [Capra hircus] diamond 147 50.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Capra Capra hircus
31741915 31741915 PRJNA1047749_P_NODE_47557_length_224_cov_6.238411_g47290_i0 PRJNA1047749 47557 224 6.238411 13.97404064 Ovis aries 9940 Chordata Chordata 43.1 0.0213   NR KAG5193595.1 9940 g47290 i0 48.8 0.549107142857143 41 19 53.6 2 175 56 260 299 KAG5193595.1 hypothetical protein JEQ12_019956 [Ovis aries] diamond 123 43.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
31836725 31836725 PRJNA1047749_P_NODE_29677_length_289_cov_1.888889_g29410_i0 PRJNA1047749 29677 289 1.888889 5.45888921 Ovis ammon polii 230172 Chordata Chordata 99.8 1.75e-22   NR KAI4548445.1 230172 g29410 i0 92.5 0.550173010380623 53 4 55 0 103 261 228 280 KAI4548445.1 hypothetical protein MG293_000775 [Ovis ammon polii] diamond 159 99.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis ammon
31868425 31868425 PRJNA1047749_P_NODE_38237_length_255_cov_2.626374_g37970_i0 PRJNA1047749 38237 255 2.626374 6.6972537 Ranitomeya imitator 111125 Chordata Chordata 43.9 0.0152   NR CAJ0956274.1 111125 g37970 i0 55.9 0.4 34 15 40 0 153 254 1 34 CAJ0956274.1 unnamed protein product [Ranitomeya imitator] diamond 102 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
31923660 31923660 PRJNA1047749_P_NODE_4817_length_542_cov_6.174840_g4568_i0 PRJNA1047749 4817 542 6.17484 33.4676328 root 1 Root_unresolved Root_unresolved 238 2.1e-72   NR XP_030110853.2 10090 g4568 i0 99.1 8.34686346863469 116 1 64.2 0 540 193 101 216 XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus] diamond 4524 239 0.99581589958159 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
32058356 32058356 PRJNA1047749_P_NODE_34018_length_271_cov_2.095960_g33751_i0 PRJNA1047749 34018 271 2.09596 5.6800516 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 73.9 5.38e-13   NR CAI9705609.1 3082113 g33751 i0 75.5 0.542435424354244 49 12 54.2 0 34 180 1 49 CAI9705609.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 147 73.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
32501628 32501628 PRJNA1047749_P_NODE_33859_length_271_cov_5.141414_g33592_i0 PRJNA1047749 33859 271 5.141414 13.93323194 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 81.6 9.67e-16   NR CAI9704897.1 3082113 g33592 i0 69.5 0.653136531365314 59 18 65.3 0 1 177 165 223 CAI9704897.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 177 81.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
32564954 32564954 PRJNA1047749_P_NODE_50279_length_206_cov_6.827068_g50012_i0 PRJNA1047749 50279 206 6.827068 14.06376008 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 68.9 1.26e-12   NR CAI9691666.1 3082113 g50012 i0 55.6 1.04854368932039 72 20 87.4 2 195 16 64 135 CAI9691666.1 unnamed protein product [Rangifer tarandus platyrhynchus] diamond 216 68.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
32658823 32658823 PRJNA1047749_P_NODE_35720_length_264_cov_3.089005_g35453_i0 PRJNA1047749 35720 264 3.089005 8.1549732 Ursus maritimus 29073 Chordata Chordata 47 0.00144   NR XP_040500652.1 29073 g35453 i0 58.3 0.409090909090909 36 15 40.9 0 41 148 305 340 XP_040500652.1 uncharacterized protein LOC121106044 [Ursus maritimus] diamond 108 47 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ursus Ursus maritimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;