RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1047551" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA1047551 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28330101 28330101 PRJNA1047551_S_NODE_8046_length_181_cov_3.130137_g7919_i0 PRJNA1047551 8046 181 3.130137 5.66554797 Theionarchaea archaeon 2747605 Archaea Archaea 48.9 1.06e-4   NR MBU7025436.1 2747605 g7919 i0 51 0.812154696132597 49 23 79.6 1 146 3 394 442 MBU7025436.1 metallophosphoesterase [Theionarchaea archaeon] diamond 147 48.9 1 Archaea   Methanobacteriati Methanobacteriota Theionarchaea       Theionarchaea archaeon
28361651 28361651 PRJNA1047551_S_NODE_8486_length_178_cov_1.930070_g8359_i0 PRJNA1047551 8486 178 1.93007 3.4355246 Marine Group IV archaeon HikBin1 2675326 Archaea Archaea 42.7 0.00428   NR WP_415487573.1 2675326 g8359 i0 43.2 0.741573033707865 44 25 74.2 0 177 46 55 98 WP_415487573.1 FAM210A/B-like domain-containing protein [Candidatus Hikarchaeum yamanae] diamond 132 42.7 1 Archaea   Methanobacteriati Methanobacteriota Candidatus Hikarchaeia Candidatus Hikarchaeales Candidatus Hikarchaeaceae Candidatus Hikarchaeum Candidatus Hikarchaeum yamanae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;