RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1047321" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA1047321 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27319841 27319841 PRJNA1047321_P_NODE_6703_length_250_cov_0.870056_g6532_i0 PRJNA1047321 6703 250 0.870056 2.17514 Acinetobacter phage VB_ApiP_XC38 2655002 Viruses Viruses 90.9 8.94e-21   NR YP_010105047.1 2655002 g6532 i0 56 1.8 75 33 90 0 1 225 101 175 YP_010105047.1 hypothetical protein KNU81_gp57 [Acinetobacter phage VB_ApiP_XC38] diamond 450 90.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Exceevirus Exceevirus Xc38
27572369 27572369 PRJNA1047321_P_NODE_5904_length_262_cov_1.449735_g5733_i0 PRJNA1047321 5904 262 1.449735 3.7983057 Acinetobacter phage VB_ApiP_XC38 2655002 Viruses Viruses 74.7 2.83e-15   NR YP_010104991.1 2655002 g5733 i0 47.4 0.870229007633588 76 40 87 0 2 229 16 91 YP_010104991.1 hypothetical protein KNU81_gp01 [Acinetobacter phage VB_ApiP_XC38] diamond 228 74.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Exceevirus Exceevirus Xc38
28993535 28993535 PRJNA1047321_P_NODE_6108_length_258_cov_0.735135_g5937_i0 PRJNA1047321 6108 258 0.735135 1.8966483 Pimephales minnow adintovirus 2609864 Viruses Viruses 45.8 0.00334   NR DAC81404.1 2609864 g5937 i0 33.3 1.95348837209302 84 55 96.5 1 10 258 40 123 DAC81404.1 TPA_asm: hypothetical protein [Pimephales minnow adintovirus] diamond 504 46.2 0.991341991341991 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;