RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1047321" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1047321 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26940193 26940193 PRJNA1047321_P_NODE_6822_length_249_cov_1.710227_g6651_i0 PRJNA1047321 6822 249 1.710227 4.25846523 Naganishia liquefaciens 104408 Fungi Fungi 142 1.7e-37   NR GHJ86687.1 104408 g6651 i0 94 1 83 5 100 0 249 1 436 518 GHJ86687.1 hypothetical protein NliqN6_3089 [Naganishia liquefaciens] diamond 249 142 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Naganishia Naganishia liquefaciens
28772147 28772147 PRJNA1047321_P_NODE_7387_length_247_cov_0.885057_g7216_i0 PRJNA1047321 7387 247 0.885057 2.18609079 Filobasidium floriforme 5210 Fungi Fungi 96.3 5.59e-21   NR XP_046039278.1 5210 g7216 i0 71.8 0.947368421052632 78 20 94.7 2 236 3 353 428 XP_046039278.1 uncharacterized protein HD553DRAFT_305450 [Filobasidium floriforme] diamond 234 96.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
28890330 28890330 PRJNA1047321_P_NODE_6448_length_251_cov_0.865169_g6277_i0 PRJNA1047321 6448 251 0.865169 2.17157419 Rhodotorula 5533 Fungi Fungi 168 2.5999999999999998e-46   NR KAG0659014.1 5537 g6277 i0 100 1.9840637450199201 83 0 99.2 0 251 3 1158 1240 KAG0659014.1 hypothetical protein C6P46_005399 [Rhodotorula mucilaginosa] diamond 498 168 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula mucilaginosa
30351794 30351794 PRJNA1047321_P_NODE_7612_length_246_cov_0.890173_g7441_i0 PRJNA1047321 7612 246 0.890173 2.18982558 Pholiota molesta 2066989 Fungi Fungi 43.5 0.0217   NR KAF8203893.1 2066989 g7441 i0 56.7 0.365853658536585 30 13 36.6 0 10 99 694 723 KAF8203893.1 S-adenosyl-L-methionine-dependent methyltransferase [Pholiota molesta] diamond 90 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Strophariaceae Pholiota Pholiota molesta
30825125 30825125 PRJNA1047321_P_NODE_6754_length_250_cov_0.870056_g6583_i0 PRJNA1047321 6754 250 0.870056 2.17514 Rhodotorula mucilaginosa 5537 Fungi Fungi 82 3.87e-18   NR KAG0664603.1 5537 g6583 i0 100 0.54 45 0 54 0 248 114 57 101 KAG0664603.1 hypothetical protein C6P46_001199 [Rhodotorula mucilaginosa] diamond 135 82 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula mucilaginosa
32185045 32185045 PRJNA1047321_P_NODE_7338_length_247_cov_0.885057_g7167_i0 PRJNA1047321 7338 247 0.885057 2.18609079 Tilletiopsis washingtonensis 58919 Fungi Fungi 58.5 1.07e-7   NR XP_025599890.1 58919 g7167 i0 87.9 0.40080971659919 33 4 40.1 0 133 35 461 493 XP_025599890.1 peptidyl-prolyl cis-trans isomerase cyp15 [Tilletiopsis washingtonensis] diamond 99 58.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;