RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1046144" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1046144 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28077463 28077463 PRJNA1046144_P_NODE_71745_length_212_cov_2.601399_g71450_i0 PRJNA1046144 71745 212 2.601399 5.51496588 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 63.2 1.36e-9   NR MBX9674102.1 2364082 g71450 i0 46.9 0.905660377358491 64 34 90.6 0 212 21 273 336 MBX9674102.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 192 63.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31868372 31868372 PRJNA1046144_P_NODE_45637_length_257_cov_2.707447_g45342_i0 PRJNA1046144 45637 257 2.707447 6.95813879 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 97.4 1.35e-21   NR MDR3615585.1 2364082 g45342 i0 48.2 0.992217898832685 85 44 99.2 0 2 256 285 369 MDR3615585.1 HAMP domain-containing sensor histidine kinase [Candidatus Obscuribacterales bacterium] diamond 255 97.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
32311793 32311793 PRJNA1046144_P_NODE_51939_length_243_cov_2.258621_g51644_i0 PRJNA1046144 51939 243 2.258621 5.48844903 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 58.2 9.55e-8   NR MFA6560206.1 2364082 g51644 i0 49.2 1.55555555555556 63 31 77.8 1 234 46 9 70 MFA6560206.1 tetratricopeptide repeat protein [Candidatus Obscuribacterales bacterium] diamond 378 58.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;