RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1044115" and tax_phylum = "Ciliophora"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1044115 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27311886 27311886 PRJNA1044115_P_NODE_37903_length_247_cov_1.793103_g37719_i0 PRJNA1044115 37903 247 1.793103 4.42896441 root 1 Root_unresolved Root_unresolved 130 7.64e-36   NR CDW71769.1 5949 g37719 i0 93 2.58704453441296 71 5 86.2 0 33 245 1 71 CDW71769.1 transposase [Stylonychia lemnae] diamond 639 130 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28108942 28108942 PRJNA1044115_P_NODE_13825_length_397_cov_4.104938_g13641_i0 PRJNA1044115 13825 397 4.104938 16.29660386 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 92.8 1.95e-20   NR QTT61052.1 5940 g13641 i0 46.3 0.717884130982368 95 46 71.8 1 1 285 55 144 QTT61052.1 hypothetical protein [Euplotes aediculatus] diamond 285 92.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
28235160 28235160 PRJNA1044115_P_NODE_35326_length_251_cov_0.876404_g35142_i0 PRJNA1044115 35326 251 0.876404 2.19977404 Euplotes vanleeuwenhoeki 2794224 SAR_Eukaryotes SAR_Eukaryotes 132 1.68e-33   NR YP_010117025.1 2794224 g35142 i0 82.7 4.48207171314741 75 13 89.6 0 25 249 99 173 YP_010117025.1 Cytochrome c oxidase subunit 2 precursor [Euplotes vanleeuwenhoeki] diamond 1125 132 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vanleeuwenhoeki
28677563 28677563 PRJNA1044115_P_NODE_26047_length_286_cov_1.314554_g25863_i0 PRJNA1044115 26047 286 1.314554 3.75962444 Moneuplotes minuta 74792 SAR_Eukaryotes SAR_Eukaryotes 167 1.48e-47   NR ACX30945.1 74792 g25863 i0 89.4 1.97202797202797 94 10 98.6 0 3 284 35 128 ACX30945.1 cytochrome b [Moneuplotes minuta] diamond 564 167 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes minuta
28740597 28740597 PRJNA1044115_P_NODE_44147_length_202_cov_4.209302_g43963_i0 PRJNA1044115 44147 202 4.209302 8.50279004 Euplotes vannus 5939 SAR_Eukaryotes SAR_Eukaryotes 62.4 2.52e-9   NR QTT61064.1 5939 g43963 i0 77.5 0.594059405940594 40 9 59.4 0 83 202 392 431 QTT61064.1 hypothetical protein [Euplotes vannus] diamond 120 62.4 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes vannus
28898310 28898310 PRJNA1044115_P_NODE_36228_length_250_cov_0.881356_g36044_i0 PRJNA1044115 36228 250 0.881356 2.20339 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 70.9 5.29e-12   NR KAL4509228.1 2486642 g36044 i0 46.9 0.768 64 31 74.4 2 202 17 930 992 KAL4509228.1 hypothetical protein ABPG72_018159 [Tetrahymena utriculariae] diamond 192 70.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
30414705 30414705 PRJNA1044115_P_NODE_43973_length_211_cov_4.862319_g43789_i0 PRJNA1044115 43973 211 4.862319 10.25949309 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 119 1.36e-33   NR QTT61051.1 5940 g43789 i0 92.4 0.938388625592417 66 5 93.8 0 211 14 10 75 QTT61051.1 ATPase subunit 9 [Euplotes aediculatus] diamond 198 119 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;