contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA1044115" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10374897 | 10374897 | PRJNA1044115_P_NODE_41649_length_242_cov_0.923077_g41465_i0 | PRJNA1044115 | 41649 | 242 | 0.923077 | 2.23384634 | Thermoleophilaceae bacterium | 2732252 | Bacteria | Bacteria | 68.2 | 3.99e-11 | NR | HEY7455293.1 | 2732252 | g41465 | i0 | 48 | 0.929752066115702 | 75 | 39 | 93 | 0 | 237 | 13 | 507 | 581 | HEY7455293.1 PP2C family protein-serine/threonine phosphatase [Thermoleophilaceae bacterium] | diamond | 225 | 68.2 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Thermoleophilales | Thermoleophilaceae | Thermoleophilaceae bacterium | |||
| 18860413 | 18860413 | PRJNA1044115_P_NODE_40915_length_243_cov_0.917647_g40731_i0 | PRJNA1044115 | 40915 | 243 | 0.917647 | 2.22988221 | Mycobacterium gordonae | 1778 | Bacteria | Bacteria | 149 | 2.49e-40 | NR | WP_069433526.1 | 1778 | g40731 | i0 | 96.3 | 0.987654320987654 | 80 | 3 | 98.8 | 0 | 2 | 241 | 337 | 416 | WP_069433526.1 CocE/NonD family hydrolase [Mycobacterium gordonae] | diamond | 240 | 149 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium gordonae | ||
| 26940145 | 26940145 | PRJNA1044115_P_NODE_34102_length_253_cov_0.866667_g33918_i0 | PRJNA1044115 | 34102 | 253 | 0.866667 | 2.19266751 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 42.7 | 0.037 | NR | HXS44257.1 | 2586742 | g33918 | i0 | 32.2 | 0.699604743083004 | 59 | 39 | 68.8 | 1 | 3 | 176 | 93 | 151 | HXS44257.1 prolipoprotein diacylglyceryl transferase [Solirubrobacteraceae bacterium] | diamond | 177 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 27730545 | 27730545 | PRJNA1044115_P_NODE_41124_length_243_cov_0.917647_g40940_i0 | PRJNA1044115 | 41124 | 243 | 0.917647 | 2.22988221 | Nocardia sp. NPDC | 1821 | Bacteria | Bacteria | 45.1 | 0.00597 | NR | WP_397056814.1 | 3364316 | g40940 | i0 | 52.5 | 0.493827160493827 | 40 | 14 | 48.1 | 2 | 28 | 144 | 660 | 695 | WP_397056814.1 tetratricopeptide repeat protein, partial [Nocardia sp. NPDC049526] | diamond | 120 | 45.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia sp. NPDC049526 | ||
| 28582857 | 28582857 | PRJNA1044115_P_NODE_39647_length_245_cov_0.906977_g39463_i0 | PRJNA1044115 | 39647 | 245 | 0.906977 | 2.22209365 | Curtobacterium sp. VKM Ac-2865 | 2783817 | Bacteria | Bacteria | 73.9 | 8.41e-15 | NR | WP_194626297.1 | 2783817 | g39463 | i0 | 52.9 | 0.83265306122449 | 68 | 30 | 83.3 | 1 | 204 | 1 | 41 | 106 | WP_194626297.1 hypothetical protein [Curtobacterium sp. VKM Ac-2865] | diamond | 204 | 73.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Curtobacterium | Curtobacterium sp. VKM Ac-2865 | ||
| 28835304 | 28835304 | PRJNA1044115_P_NODE_26668_length_283_cov_1.280952_g26484_i0 | PRJNA1044115 | 26668 | 283 | 1.280952 | 3.62509416 | Gaiella sp. | 2663207 | Bacteria | Bacteria | 163 | 2.3e-44 | NR | HEY1315807.1 | 2663207 | g26484 | i0 | 85.1 | 1.99293286219081 | 94 | 14 | 99.6 | 0 | 1 | 282 | 44 | 137 | HEY1315807.1 TM0106 family RecB-like putative nuclease [Gaiella sp.] | diamond | 564 | 163 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Gaiellales | Gaiellaceae | Gaiella | Gaiella sp. | ||
| 30035312 | 30035312 | PRJNA1044115_P_NODE_36031_length_250_cov_0.881356_g35847_i0 | PRJNA1044115 | 36031 | 250 | 0.881356 | 2.20339 | Mycolicibacter terrae | 1788 | Bacteria | Bacteria | 41.6 | 0.0428 | NR | BBX24085.1 | 1788 | g35847 | i0 | 26.8 | 0.852 | 71 | 49 | 81.6 | 1 | 246 | 43 | 53 | 123 | BBX24085.1 hypothetical protein MTER_34960 [Mycolicibacter terrae] | diamond | 213 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacter | Mycolicibacter terrae | ||
| 31955241 | 31955241 | PRJNA1044115_P_NODE_43417_length_229_cov_2.500000_g43233_i0 | PRJNA1044115 | 43417 | 229 | 2.5 | 5.725 | Ilumatobacter | 682522 | Bacteria | Bacteria | 104 | 1.17e-26 | NR | WP_040491970.1 | 467093 | g43233 | i0 | 67.6 | 3.87772925764192 | 74 | 24 | 96.9 | 0 | 227 | 6 | 33 | 106 | WP_040491970.1 ferritin-like domain-containing protein [Ilumatobacter nonamiensis] | diamond | 888 | 104 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Ilumatobacteraceae | Ilumatobacter | Ilumatobacter nonamiensis | ||
| 32839804 | 32839804 | PRJNA1044115_P_NODE_36260_length_250_cov_0.881356_g36076_i0 | PRJNA1044115 | 36260 | 250 | 0.881356 | 2.20339 | Bacteria | 2 | Bacteria | Bacteria | 156 | 7.99e-48 | NR | HWJ99035.1 | 2201156 | g36076 | i0 | 89.2 | 1.812 | 74 | 8 | 88.8 | 0 | 27 | 248 | 1 | 74 | HWJ99035.1 hypothetical protein [Acidimicrobiales bacterium] | diamond | 453 | 157 | 0.993630573248408 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;