RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1041773" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1041773 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26813731 26813731 PRJNA1041773_P_NODE_8461_length_706_cov_1.545024_g8141_i0 PRJNA1041773 8461 706 1.545024 10.90786944 Nitrososphaeria archaeon 2268198 Archaea Archaea 221 4.4e-66   NR MBC7091228.1 2268198 g8141 i0 100 0.446175637393768 105 0 44.6 0 702 388 83 187 MBC7091228.1 DNA cytosine methyltransferase [Nitrososphaeria archaeon] diamond 315 221 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
27256437 27256437 PRJNA1041773_P_NODE_91763_length_245_cov_0.895349_g91430_i0 PRJNA1041773 91763 245 0.895349 2.19360505 Nitrosopumilus sp. 2024843 Archaea Archaea 57.4 2.69e-7   NR MDC3254044.1 2024843 g91430 i0 43.8 1.08979591836735 89 31 95.5 3 7 240 117 197 MDC3254044.1 hypothetical protein [Nitrosopumilus sp.] diamond 267 57.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31995057 31995057 PRJNA1041773_P_NODE_65398_length_270_cov_1.218274_g65065_i0 PRJNA1041773 65398 270 1.218274 3.2893398 Nitrososphaerota archaeon 2026795 Archaea Archaea 63.9 1.76e-9   NR MEM2987122.1 2026795 g65065 i0 43 0.877777777777778 79 39 87.8 1 243 7 74 146 MEM2987122.1 DEAD/DEAH box helicase family protein [Nitrososphaerota archaeon] diamond 237 63.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;