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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1041773" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1041773 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1445369 1445369 PRJNA1041773_P_NODE_68762_length_264_cov_1.612565_g68429_i0 PRJNA1041773 68762 264 1.612565 4.2571716 Halococcus sp. IIIV-5B 2321230 Archaea Archaea 146 2.03e-38   NR WP_233553902.1 2321230 g68429 i0 97.7 0.988636363636364 87 2 98.9 0 3 263 502 588 WP_233553902.1 Eco57I restriction-modification methylase domain-containing protein [Halococcus sp. IIIV-5B] diamond 261 146 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp. IIIV-5B
11648605 11648605 PRJNA1041773_P_NODE_2870_length_1205_cov_4.537102_g2670_i0 PRJNA1041773 2870 1205 4.537102 54.6720791 Archaeoglobaceae archaeon 2511821 Archaea Archaea 488 8.139999999999997e-170   NR MDK2876615.1 2511821 g2670 i0 99.2 1.26473029045643 254 2 63.2 0 1204 443 79 332 MDK2876615.1 proteasome regulatory subunit [Archaeoglobaceae archaeon] diamond 1524 488 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
16747853 16747853 PRJNA1041773_P_NODE_80894_length_250_cov_0.870056_g80561_i0 PRJNA1041773 80894 250 0.870056 2.17514 Methanothermobacter 145260 Archaea Archaea 129 2.17e-33   NR WP_112093349.1 680118 g80561 i0 96.7 3.6 60 2 72 0 183 4 232 291 WP_112093349.1 F420-non-reducing hydrogenase subunit MvhA [Methanothermobacter tenebrarum] diamond 900 129 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanothermobacter Methanothermobacter tenebrarum
16747985 16747985 PRJNA1041773_P_NODE_91314_length_245_cov_0.895349_g90981_i0 PRJNA1041773 91314 245 0.895349 2.19360505 Methanobacteriaceae archaeon 2099680 Archaea Archaea 149 6.73e-42   NR NYB26509.1 2099680 g90981 i0 92.6 0.991836734693878 81 6 99.2 0 244 2 25 105 NYB26509.1 M42 family metallopeptidase [Methanobacteriaceae archaeon] diamond 243 149 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
21847595 21847595 PRJNA1041773_P_NODE_67218_length_267_cov_1.180412_g66885_i0 PRJNA1041773 67218 267 1.180412 3.15170004 Archaeoglobi archaeon 2250530 Archaea Archaea 124 5.57e-31   NR TDA25962.1 2250530 g66885 i0 93.3 2.69662921348315 60 4 67.4 0 266 87 475 534 TDA25962.1 MAG: coenzyme-B sulfoethylthiotransferase subunit alpha [Archaeoglobi archaeon] diamond 720 124 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi       Archaeoglobi archaeon
26655060 26655060 PRJNA1041773_P_NODE_83021_length_249_cov_0.875000_g82688_i0 PRJNA1041773 83021 249 0.875 2.17875 Methanobacteriaceae archaeon 41_258 1635284 Archaea Archaea 97.1 1.46e-22   NR KUK01290.1 1635284 g82688 i0 100 0.614457831325301 51 0 61.4 0 96 248 156 206 KUK01290.1 MAG: hypothetical protein XD44_0643 [Methanobacteriaceae archaeon 41_258] diamond 153 97.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon 41_258
26908644 26908644 PRJNA1041773_P_NODE_53462_length_293_cov_2.009091_g53129_i0 PRJNA1041773 53462 293 2.009091 5.88663663 Archaeoglobaceae archaeon 2511821 Archaea Archaea 170 1.1999999999999998e-48   NR MDK2796328.1 2511821 g53129 i0 96.4 1.69965870307167 83 3 85 0 292 44 24 106 MDK2796328.1 methanol---5-hydroxybenzimidazolylcobamide Co-methyltransferase [Archaeoglobaceae archaeon] diamond 498 170 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
27003397 27003397 PRJNA1041773_P_NODE_85522_length_248_cov_0.880000_g85189_i0 PRJNA1041773 85522 248 0.88 2.1824 Methanobacteriota archaeon 2026739 Archaea Archaea 164 7.54e-45   NR MAH90707.1 2026739 g85189 i0 98.8 0.979838709677419 81 1 98 0 244 2 1112 1192 MAH90707.1 hypothetical protein [Methanobacteriota archaeon] diamond 243 164 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27216576 27216576 PRJNA1041773_P_NODE_56302_length_287_cov_1.439252_g55969_i0 PRJNA1041773 56302 287 1.439252 4.13065324 Halobacteriales 2235 Archaea Archaea 195 9.19e-57   NR WP_114578533.1 2282654 g55969 i0 96.8 2.96864111498258 94 3 98.3 0 287 6 485 578 WP_114578533.1 aconitate hydratase [Saliphagus sp. LR7] diamond 852 195 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Saliphagus Saliphagus sp. LR7
27540854 27540854 PRJNA1041773_P_NODE_53324_length_293_cov_11.463636_g52991_i0 PRJNA1041773 53324 293 11.463636 33.58845348 Pyrococcus horikoshii OT3 70601 Archaea Archaea 68.9 4.71e-12   NR BAA29289.1 70601 g52991 i0 62.5 0.655290102389078 64 21 63.5 2 292 107 58 120 BAA29289.1 171aa long hypothetical protein [Pyrococcus horikoshii OT3] diamond 192 68.9 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus horikoshii
28266748 28266748 PRJNA1041773_P_NODE_75546_length_253_cov_2.038889_g75213_i0 PRJNA1041773 75546 253 2.038889 5.15838917 Archaeoglobaceae archaeon 2511821 Archaea Archaea 62 6.79e-9   NR MEM0301944.1 2511821 g75213 i0 54.1 2.1699604743083 61 27 72.3 1 69 251 16 75 MEM0301944.1 PGF-CTERM sorting domain-containing protein [Archaeoglobaceae archaeon] diamond 549 62 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
28709160 28709160 PRJNA1041773_P_NODE_60907_length_278_cov_1.468293_g60574_i0 PRJNA1041773 60907 278 1.468293 4.08185454 Methanobacteriota archaeon 2026739 Archaea Archaea 45.8 0.00487   NR MBU38163.1 2026739 g60574 i0 34 1.07913669064748 100 35 99.3 3 3 278 1025 1101 MBU38163.1 hypothetical protein [Methanobacteriota archaeon] diamond 300 45.8 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28961841 28961841 PRJNA1041773_P_NODE_93768_length_244_cov_0.900585_g93435_i0 PRJNA1041773 93768 244 0.900585 2.1974274 Methanobacteriaceae archaeon 2099680 Archaea Archaea 158 1.65e-45   NR MBC7119430.1 2099680 g93435 i0 96.3 0.983606557377049 80 3 98.4 0 3 242 111 190 MBC7119430.1 DNA polymerase subunit beta [Methanobacteriaceae archaeon] diamond 240 158 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon
29237860 29237860 PRJNA1041773_P_NODE_56349_length_287_cov_1.439252_g56016_i0 PRJNA1041773 56349 287 1.439252 4.13065324 Methanosarcina 2207 Archaea Archaea 175 6.3e-50   NR WP_281853456.1 2210 g56016 i0 86.3 1.98606271777003 95 13 99.3 0 1 285 247 341 WP_281853456.1 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Methanosarcina thermophila] diamond 570 175 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina thermophila
30256738 30256738 PRJNA1041773_P_NODE_12472_length_585_cov_5.517578_g12145_i0 PRJNA1041773 12472 585 5.517578 32.2778313 unclassified Archaeoglobus 2643606 Archaea Archaea 248 9.16e-73   NR WP_290596638.1 2643606 g12145 i0 75.3 0.830769230769231 162 38 83.1 1 585 100 798 957 WP_290596638.1 MULTISPECIES: PGF-CTERM sorting domain-containing protein [unclassified Archaeoglobus] diamond 486 248 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Archaeoglobus  
30256750 30256750 PRJNA1041773_P_NODE_70572_length_261_cov_1.638298_g70239_i0 PRJNA1041773 70572 261 1.638298 4.27595778 Archaeoglobaceae archaeon 2511821 Archaea Archaea 157 9.01e-44   NR MDK2876425.1 2511821 g70239 i0 95.9 0.839080459770115 73 3 83.9 0 219 1 1 73 MDK2876425.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 219 157 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
30532690 30532690 PRJNA1041773_P_NODE_86873_length_247_cov_0.885057_g86540_i0 PRJNA1041773 86873 247 0.885057 2.18609079 Archaea 2157 Archaea Archaea 166 7.53e-51   NR KUK00404.1 1635284 g86540 i0 97.6 1.9919028340081 82 2 99.6 0 2 247 25 106 KUK00404.1 MAG: hypothetical protein XD44_1532 [Methanobacteriaceae archaeon 41_258] diamond 492 166 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon 41_258
30761995 30761995 PRJNA1041773_P_NODE_84994_length_248_cov_0.880000_g84661_i0 PRJNA1041773 84994 248 0.88 2.1824 Archaeoglobaceae archaeon 2511821 Archaea Archaea 92.4 2.02e-20   NR MDK2794997.1 2511821 g84661 i0 100 0.544354838709677 45 0 54.4 0 1 135 162 206 MDK2794997.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 135 92.4 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
32026724 32026724 PRJNA1041773_P_NODE_7118_length_768_cov_2.653237_g6817_i0 PRJNA1041773 7118 768 2.653237 20.37686016 Archaeoglobaceae archaeon 2511821 Archaea Archaea 404 1.3e-137   NR MDK2876432.1 2511821 g6817 i0 99 0.8203125 210 2 82 0 1 630 146 355 MDK2876432.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 630 404 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
32184978 32184978 PRJNA1041773_P_NODE_80718_length_250_cov_0.870056_g80385_i0 PRJNA1041773 80718 250 0.870056 2.17514 Methanocellales archaeon 2666334 Archaea Archaea 50.4 7.95e-5   NR MDI6902733.1 2666334 g80385 i0 41.5 0.78 65 34 78 2 249 55 662 722 MDI6902733.1 PGF-CTERM sorting domain-containing protein [Methanocellales archaeon] diamond 195 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales     Methanocellales archaeon
32216606 32216606 PRJNA1041773_P_NODE_65318_length_270_cov_1.532995_g64985_i0 PRJNA1041773 65318 270 1.532995 4.1390865 Candidatus Alkanophaga liquidiphilum 2971473 Archaea Archaea 45.1 0.00475   NR MDF2955454.1 2971473 g64985 i0 48.9 1.17777777777778 47 24 52.2 0 101 241 100 146 MDF2955454.1 hypothetical protein [Candidatus Alkanophaga liquidiphilum] diamond 318 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Alkanophagales   Candidatus Alkanophaga Candidatus Alkanophaga liquidiphilum
32311761 32311761 PRJNA1041773_P_NODE_98559_length_242_cov_0.911243_g98226_i0 PRJNA1041773 98559 242 0.911243 2.20520806 Halococcus hamelinensis 332168 Archaea Archaea 160 7.289999999999999e-46   NR WP_029601871.1 332168 g98226 i0 98.8 0.991735537190083 80 1 99.2 0 242 3 121 200 WP_029601871.1 CaiB/BaiF CoA transferase family protein [Halococcus hamelinensis] diamond 240 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus hamelinensis
32406440 32406440 PRJNA1041773_P_NODE_47159_length_310_cov_3.856397_g46826_i0 PRJNA1041773 47159 310 3.856397 11.9548307 Archaeoglobaceae archaeon 2511821 Archaea Archaea 94.7 4.26e-20   NR MDK2876431.1 2511821 g46826 i0 87.7 0.551612903225806 57 6 54.2 1 2 169 7 63 MDK2876431.1 hypothetical protein [Archaeoglobaceae archaeon] diamond 171 94.7 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae   Archaeoglobaceae archaeon
32533150 32533150 PRJNA1041773_P_NODE_17739_length_493_cov_1.823810_g17409_i0 PRJNA1041773 17739 493 1.82381 8.9913833 Methanobacteriaceae archaeon 2099680 Archaea Archaea 128 1.57e-35   NR MDI3484369.1 2099680 g17409 i0 100 0.432048681541582 71 0 43.2 0 158 370 1 71 MDI3484369.1 hypothetical protein [Methanobacteriaceae archaeon] diamond 213 128 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   Methanobacteriaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;