RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1041773" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1041773 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29151416 29151416 PRJNA1041773_P_NODE_96089_length_243_cov_0.905882_g95756_i0 PRJNA1041773 96089 243 0.905882 2.20129326 Rhodohalobacter sulfatireducens 2911366 Bacteria Bacteria 51.6 7.23e-6   NR WP_237854545.1 2911366 g95756 i0 88.5 0.641975308641975 26 3 32.1 0 2 79 116 141 WP_237854545.1 nucleoside-diphosphate kinase [Rhodohalobacter sulfatireducens] diamond 156 51.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Rhodohalobacter Rhodohalobacter sulfatireducens
30785467 30785467 PRJNA1041773_P_NODE_44254_length_320_cov_0.866397_g43921_i0 PRJNA1041773 44254 320 0.866397 2.7724704 root 1 Root_unresolved Root_unresolved 53.9 9.23e-6   NR HAW78894.1 2024824 g43921 i0 74.2 2.90625 31 8 29.1 0 101 9 1 31 HAW78894.1 hypothetical protein [Balneola sp.] diamond 930 54.3 0.992633517495396 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;