RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1040136" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1040136 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7822344 7822344 PRJNA1040136_S_NODE_1287_length_298_cov_3.702222_g1284_i0 PRJNA1040136 1287 298 3.702222 11.03262156 Rhizophagus irregularis DAOM 197198w 1432141 Fungi Fungi 73.2 8.55e-15   NR EXX72692.1 1432141 g1284 i0 71.2 1.22818791946309 52 15 52.3 0 296 141 1 52 EXX72692.1 ribosomal 60S subunit protein L29 [Rhizophagus irregularis DAOM 197198w] diamond 366 73.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
29182782 29182782 PRJNA1040136_S_NODE_1349_length_295_cov_1.581081_g1346_i0 PRJNA1040136 1349 295 1.581081 4.66418895 Pilaira anomala 64641 Fungi Fungi 104 2.52e-26   NR KAI9348827.1 64641 g1346 i0 71.2 0.671186440677966 66 19 67.1 0 1 198 58 123 KAI9348827.1 profilin [Pilaira anomala] diamond 198 104 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Pilaira Pilaira anomala

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;