RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1040136" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1040136 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30256735 30256735 PRJNA1040136_S_NODE_12_length_1225_cov_4.750000_g10_i0 PRJNA1040136 12 1225 4.75 58.1875 Polypedilum vanderplanki 319348 Arthropoda Arthropoda 70.9 3.04e-9   NR KAG5668960.1 319348 g10 i0 35.7 0.308571428571429 126 78 30.6 3 209 583 267 390 KAG5668960.1 hypothetical protein PVAND_016866 [Polypedilum vanderplanki] diamond 378 70.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Polypedilum Polypedilum vanderplanki
30920085 30920085 PRJNA1040136_S_NODE_374_length_436_cov_2.804408_g371_i0 PRJNA1040136 374 436 2.804408 12.22721888 Triatoma brasiliensis 65344 Arthropoda Arthropoda 95.9 1.89e-22   NR ABJ96355.1 65344 g371 i0 56.5 1.58256880733945 115 49 79.1 1 8 352 1 114 ABJ96355.1 60S acidic ribosomal protein P2 [Triatoma brasiliensis] diamond 690 95.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Reduviidae Triatoma Triatoma brasiliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;