RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1036688" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1036688 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24395720 24395720 PRJNA1036688_P_NODE_4960_length_274_cov_2.552743_g4668_i0 PRJNA1036688 4960 274 2.552743 6.99451582 Fungi 4751 Fungi Fungi 116 1.68e-30   NR CAK7890844.1 148631 g4668 i0 64.4 2.01459854014599 90 32 98.5 0 272 3 89 178 CAK7890844.1 40S ribosomal protein S8 [[Candida] anglica] diamond 552 116 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Kurtzmaniella [Candida] anglica
29308811 29308811 PRJNA1036688_P_NODE_8709_length_185_cov_2.060811_g8417_i0 PRJNA1036688 8709 185 2.060811 3.81250035 Pycnora praestabilis 1453791 Fungi Fungi 43.1 0.0129   NR KAI9822378.1 1453791 g8417 i0 34.5 0.891891891891892 55 36 89.2 0 7 171 795 849 KAI9822378.1 MAG: Anaphase-promoting complex subunit 1 [Pycnora praestabilis] diamond 165 43.1 1 Eukaryota Opisthokonta Fungi Ascomycota Candelariomycetes Candelariales Pycnoraceae Pycnora Pycnora praestabilis
29742697 29742697 PRJNA1036688_P_NODE_11630_length_155_cov_1.635593_g11338_i0 PRJNA1036688 11630 155 1.635593 2.53516915 Fungi 4751 Fungi Fungi 60.5 3.51e-9   NR KAI9666927.1 91480 g11338 i0 64 12.5806451612903 50 18 96.8 0 2 151 168 217 KAI9666927.1 MAG: 40S ribosomal protein S6 [Alyxoria varia] diamond 1950 60.5 1 Eukaryota Opisthokonta Fungi Ascomycota Arthoniomycetes Arthoniales Lecanographaceae Alyxoria Alyxoria varia
31070034 31070034 PRJNA1036688_P_NODE_9695_length_173_cov_2.000000_g9403_i0 PRJNA1036688 9695 173 2 3.46 Ascomycota 4890 Fungi Fungi 80.5 4.68e-16   NR KAI9880785.1 318763 g9403 i0 67.3 8.70520231213873 52 17 90.2 0 158 3 86 137 KAI9880785.1 MAG: hypothetical protein M1830_000221 [Pleopsidium flavum] diamond 1506 80.5 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Acarosporales Acarosporaceae Pleopsidium Pleopsidium flavum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;