RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1036688" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1036688 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27856420 27856420 PRJNA1036688_P_NODE_10625_length_164_cov_1.181102_g10333_i0 PRJNA1036688 10625 164 1.181102 1.93700728 Prevotella pallens 60133 Bacteria Bacteria 105 6.3e-25   NR MBF1514088.1 60133 g10333 i0 96.3 0.98780487804878 54 2 98.8 0 164 3 346 399 MBF1514088.1 DUF11 domain-containing protein [Prevotella pallens] diamond 162 105 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella pallens
29719087 29719087 PRJNA1036688_P_NODE_9530_length_175_cov_1.688406_g9238_i0 PRJNA1036688 9530 175 1.688406 2.9547105 Flavobacteriales bacterium 2021391 Bacteria Bacteria 41.6 0.0399   NR MFN8864399.1 2021391 g9238 i0 39.6 1.64571428571429 48 27 82.3 1 151 8 381 426 MFN8864399.1 MopE-related protein [Flavobacteriales bacterium] diamond 288 41.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;