RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1035005" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1035005 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3995685 3995685 PRJNA1035005_P_NODE_83344_length_243_cov_0.917647_g82938_i0 PRJNA1035005 83344 243 0.917647 2.22988221 Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 1986206 Bacteria Bacteria 165 2.38e-48   NR WP_129693115.1 1986206 g82938 i0 95 0.987654320987654 80 4 98.8 0 3 242 247 326 WP_129693115.1 lipid II:glycine glycyltransferase FemX [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 240 165 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
28519635 28519635 PRJNA1035005_P_NODE_52767_length_253_cov_2.238889_g52361_i0 PRJNA1035005 52767 253 2.238889 5.66438917 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 157 1.2599999999999999e-42   NR MBQ2638555.1 2026720 g52361 i0 85.7 1.99209486166008 84 12 99.6 0 253 2 193 276 MBQ2638555.1 M1 family metallopeptidase [Candidatus Saccharibacteria bacterium] diamond 504 157 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29624107 29624107 PRJNA1035005_P_NODE_55490_length_252_cov_1.988827_g55084_i0 PRJNA1035005 55490 252 1.988827 5.01184404 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 123 9.55e-34   NR OYX41100.1 1970479 g55084 i0 72 0.976190476190476 82 23 97.6 0 4 249 1 82 OYX41100.1 MAG: hypothetical protein B7Y94_05545, partial [Candidatus Saccharibacteria bacterium 32-49-12] diamond 246 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
31646840 31646840 PRJNA1035005_P_NODE_32097_length_280_cov_1.149758_g31691_i0 PRJNA1035005 32097 280 1.149758 3.2193224 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 73.6 1.15e-13   NR MBM3209833.1 2026720 g31691 i0 41.8 0.975 91 53 97.5 0 280 8 87 177 MBM3209833.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 273 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31986852 31986852 PRJNA1035005_P_NODE_38198_length_272_cov_1.291457_g37792_i0 PRJNA1035005 38198 272 1.291457 3.51276304 Candidatus Saccharimonas 1331051 Bacteria Bacteria 168 1.48e-46   NR MBP6038079.1 1917697 g37792 i0 95.6 6.9375 90 4 99.3 0 271 2 274 363 MBP6038079.1 DNA translocase FtsK 4TM domain-containing protein [Candidatus Saccharimonas sp.] diamond 1887 169 0.994082840236686 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32058240 32058240 PRJNA1035005_P_NODE_88238_length_233_cov_3.650000_g87832_i0 PRJNA1035005 88238 233 3.65 8.5045 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 144 8.25e-38   NR MDB5162891.1 2026720 g87832 i0 89.5 2.93562231759657 76 8 97.9 0 233 6 91 166 MDB5162891.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 684 144 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;