metadata: contig_metadata: 8 rows where analysis = "diamond", bioproject = "PRJNA1035005" and tax

8 rows where analysis = "diamond", bioproject = "PRJNA1035005" and tax_phylum = "Campylobacterota"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
28298433	28298433	PRJNA1035005_P_NODE_88946_length_230_cov_2.745223_g88539_i0	PRJNA1035005	88946	230	2.745223	6.3140129	Helicobacter pylori	210	Bacteria	Bacteria	57.8	7.23e-9	NR	GAA8683376.1	210	g88539	i0	86.2	0.730434782608696	29	4	37.8	0	168	82	5	33	GAA8683376.1 hypothetical protein Kyoto145A_0600 [Helicobacter pylori]	diamond	168	57.8	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
30256689	30256689	PRJNA1035005_P_NODE_3292_length_603_cov_1.986792_g2902_i0	PRJNA1035005	3292	603	1.986792	11.98035576	Campylobacterota bacterium	2026809	Bacteria	Bacteria	73.9	8.52e-12	NR	MCL4431196.1	2026809	g2902	i0	30.8	0.646766169154229	130	75	58.2	3	417	67	4	131	MCL4431196.1 hypothetical protein [Campylobacterota bacterium]	diamond	390	73.9	1	Bacteria	Pseudomonadati	Campylobacterota					Campylobacterota bacterium
30635306	30635306	PRJNA1035005_P_NODE_46553_length_261_cov_1.659574_g46147_i0	PRJNA1035005	46553	261	1.659574	4.33148814	Campylobacter hominis ATCC BAA-381	360107	Bacteria	Bacteria	47	9.77e-5	NR	ABS50882.1	360107	g46147	i0	62.1	0.333333333333333	29	11	33.3	0	106	20	30	58	ABS50882.1 hypothetical protein CHAB381_A0001 [Campylobacter hominis ATCC BAA-381]	diamond	87	47	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter hominis
31394151	31394151	PRJNA1035005_P_NODE_79476_length_244_cov_0.912281_g79070_i0	PRJNA1035005	79476	244	0.912281	2.22596564	Sulfurospirillum sp.	2053622	Bacteria	Bacteria	160	2.55e-47	NR	MBP6325389.1	2053622	g79070	i0	97.5	0.983606557377049	80	2	98.4	0	3	242	144	223	MBP6325389.1 magnesium transporter [Sulfurospirillum sp.]	diamond	240	160	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Sulfurospirillaceae	Sulfurospirillum	Sulfurospirillum sp.
31836593	31836593	PRJNA1035005_P_NODE_55177_length_253_cov_0.866667_g54771_i0	PRJNA1035005	55177	253	0.866667	2.19266751	Helicobacter pylori	210	Bacteria	Bacteria	61.2	1.85e-10	NR	GAA9176259.1	210	g54771	i0	66.7	0.462450592885375	39	13	46.2	0	252	136	10	48	GAA9176259.1 hypothetical protein Kyoto193A_0410 [Helicobacter pylori]	diamond	117	61.2	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
32018623	32018623	PRJNA1035005_P_NODE_29958_length_282_cov_2.497608_g29552_i0	PRJNA1035005	29958	282	2.497608	7.04325456	Campylobacter	194	Bacteria	Bacteria	99.4	2.2299999999999998e-23	NR	WP_065844591.1	196	g29552	i0	52.7	6.93617021276596	93	34	98.9	1	1	279	62	144	WP_065844591.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Campylobacter fetus]	diamond	1956	100	0.994	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter fetus
32753468	32753468	PRJNA1035005_P_NODE_79740_length_244_cov_0.912281_g79334_i0	PRJNA1035005	79740	244	0.912281	2.22596564	Malaciobacter mytili	603050	Bacteria	Bacteria	81.3	1e-15	NR	WP_129096761.1	603050	g79334	i0	49.4	0.971311475409836	79	39	97.1	1	3	239	522	599	WP_129096761.1 5-histidylcysteine sulfoxide synthase [Malaciobacter mytili]	diamond	237	81.3	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Malaciobacter	Malaciobacter mytili
32776877	32776877	PRJNA1035005_P_NODE_35840_length_275_cov_1.316832_g35434_i0	PRJNA1035005	35840	275	1.316832	3.621288	Pseudomonadati	3379134	Bacteria	Bacteria	68.2	2.05e-12	NR	GAA9176272.1	210	g35434	i0	96.8	1.58181818181818	31	1	33.8	0	274	182	1	31	GAA9176272.1 hypothetical protein Kyoto193A_0470 [Helicobacter pylori]	diamond	435	68.6	0.994169096209913	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;