RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1035005" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1035005 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26686855 26686855 PRJNA1035005_P_NODE_9521_length_370_cov_1.047138_g9117_i0 PRJNA1035005 9521 370 1.047138 3.8744106 Malassezia restricta virus MrV4 76775 Viruses Viruses 178 3.479999999999999e-55   NR QJA42333.1 2727864 g9117 i0 73 0.9 111 30 90 0 366 34 14 124 QJA42333.1 hypothetical protein MRV40S_001 [Malassezia restricta virus MrV40S] diamond 333 178 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
32501480 32501480 PRJNA1035005_P_NODE_13539_length_333_cov_1.107692_g13133_i0 PRJNA1035005 13539 333 1.107692 3.68861436 brine shrimp dicistrovirus 1 2900466 Viruses Viruses 61.2 3.41e-8   NR UNI73824.1 2900466 g13133 i0 45 0.540540540540541 60 33 54.1 0 182 3 649 708 UNI73824.1 MAG: capsid protein [brine shrimp dicistrovirus 1] diamond 180 61.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   brine shrimp dicistrovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;