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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA1035005" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 27 ✖

bioproject 1

  • PRJNA1035005 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3995685 3995685 PRJNA1035005_P_NODE_83344_length_243_cov_0.917647_g82938_i0 PRJNA1035005 83344 243 0.917647 2.22988221 Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 1986206 Bacteria Bacteria 165 2.38e-48   NR WP_129693115.1 1986206 g82938 i0 95 0.987654320987654 80 4 98.8 0 3 242 247 326 WP_129693115.1 lipid II:glycine glycyltransferase FemX [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 240 165 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
18859505 18859505 PRJNA1035005_P_NODE_5055_length_472_cov_2.859649_g4655_i0 PRJNA1035005 5055 472 2.859649 13.49754328 Candidatus Colwellbacteria bacterium 2750074 Bacteria Bacteria 171 2.12e-51   NR MDD4931421.1 2750074 g4655 i0 71.9 0.724576271186441 114 28 72.5 1 127 468 33 142 MDD4931421.1 hypothetical protein [Candidatus Colwellbacteria bacterium] diamond 342 171 1 Bacteria Bacteria candidate phyla   Candidatus Colwelliibacteriota         Candidatus Colwellbacteria bacterium
19294567 19294567 PRJNA1035005_P_NODE_30036_length_282_cov_1.976077_g29630_i0 PRJNA1035005 30036 282 1.976077 5.57253714 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 179 1.08e-52   NR MBB1553960.1 2044595 g29630 i0 100 0.98936170212766 93 0 98.9 0 281 3 87 179 MBB1553960.1 DEAD/DEAH box helicase family protein [Candidatus Altimarinota bacterium] diamond 279 179 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26749866 26749866 PRJNA1035005_P_NODE_82181_length_243_cov_0.917647_g81775_i0 PRJNA1035005 82181 243 0.917647 2.22988221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 1.6599999999999996e-43   NR MFA6601613.1 2053589 g81775 i0 88.8 0.987654320987654 80 9 98.8 0 242 3 227 306 MFA6601613.1 matrixin family metalloprotease [Candidatus Paceibacterota bacterium] diamond 240 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27690990 27690990 PRJNA1035005_P_NODE_4724_length_490_cov_3.052758_g4324_i0 PRJNA1035005 4724 490 3.052758 14.9585142 Bacteria 2 Bacteria Bacteria 124 3.26e-32   NR MBN1595395.1 2052330 g4324 i0 48.9 6.43469387755102 133 67 80.8 1 94 489 5 137 MBN1595395.1 adenylate kinase [candidate division FCPU426 bacterium] diamond 3153 125 0.992 Bacteria Bacteria candidate phyla   candidate division FCPU426         candidate division FCPU426 bacterium
28045860 28045860 PRJNA1035005_P_NODE_60565_length_251_cov_0.876404_g60159_i0 PRJNA1035005 60565 251 0.876404 2.19977404 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 92.8 3.78e-21   NR MFC1845728.1 2030827 g60159 i0 53.7 2.90438247011952 82 38 98 0 2 247 98 179 MFC1845728.1 HAD family acid phosphatase [Candidatus Dependentiae bacterium] diamond 729 92.8 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
28235095 28235095 PRJNA1035005_P_NODE_13366_length_334_cov_1.195402_g12960_i0 PRJNA1035005 13366 334 1.195402 3.99264268 Minisyncoccota bacterium 2053589 Bacteria Bacteria 80.1 8.84e-15   NR MDR3547936.1 2053589 g12960 i0 34.9 0.979041916167665 109 69 97.9 1 8 334 291 397 MDR3547936.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 327 80.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28519635 28519635 PRJNA1035005_P_NODE_52767_length_253_cov_2.238889_g52361_i0 PRJNA1035005 52767 253 2.238889 5.66438917 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 157 1.2599999999999999e-42   NR MBQ2638555.1 2026720 g52361 i0 85.7 1.99209486166008 84 12 99.6 0 253 2 193 276 MBQ2638555.1 M1 family metallopeptidase [Candidatus Saccharibacteria bacterium] diamond 504 157 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28551271 28551271 PRJNA1035005_P_NODE_84167_length_242_cov_1.792899_g83761_i0 PRJNA1035005 84167 242 1.792899 4.33881558 Patescibacteria group bacterium 2052139 Bacteria Bacteria 116 7.89e-29   NR MES2630483.1 2052139 g83761 i0 83.1 1.46280991735537 59 10 73.1 0 240 64 334 392 MES2630483.1 ubiquitin-like domain-containing protein [Patescibacteria group bacterium] diamond 354 116 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28582796 28582796 PRJNA1035005_P_NODE_11327_length_351_cov_1.043165_g10922_i0 PRJNA1035005 11327 351 1.043165 3.66150915 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 49.7 4.48e-4   NR MDR3549977.1 2803731 g10922 i0 37.6 0.794871794871795 93 55 78.6 3 295 20 214 304 MDR3549977.1 ankyrin repeat domain-containing protein [Candidatus Babeliales bacterium] diamond 279 49.7 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
28582815 28582815 PRJNA1035005_P_NODE_90347_length_210_cov_4.503650_g89940_i0 PRJNA1035005 90347 210 4.50365 9.457665 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.5 0.0129   NR HEX2230376.1 2838779 g89940 i0 38.5 0.742857142857143 52 29 74.3 1 3 158 418 466 HEX2230376.1 alanine--tRNA ligase [Candidatus Binatia bacterium] diamond 156 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28803452 28803452 PRJNA1035005_P_NODE_79228_length_244_cov_0.912281_g78822_i0 PRJNA1035005 79228 244 0.912281 2.22596564 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 59.3 5.47e-8   NR MBI4869153.1 2053640 g78822 i0 59.6 0.577868852459016 47 19 57.8 0 103 243 48 94 MBI4869153.1 M48 family metallopeptidase [Candidatus Wallbacteria bacterium] diamond 141 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
29182737 29182737 PRJNA1035005_P_NODE_16329_length_315_cov_2.904959_g15923_i0 PRJNA1035005 16329 315 2.904959 9.15062085 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 92 2.58e-19   NR MEX0940507.1 2803731 g15923 i0 52.7 0.866666666666667 91 41 86.7 2 33 305 67 155 MEX0940507.1 histone deacetylase [Candidatus Babeliales bacterium] diamond 273 92 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
29624107 29624107 PRJNA1035005_P_NODE_55490_length_252_cov_1.988827_g55084_i0 PRJNA1035005 55490 252 1.988827 5.01184404 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 123 9.55e-34   NR OYX41100.1 1970479 g55084 i0 72 0.976190476190476 82 23 97.6 0 4 249 1 82 OYX41100.1 MAG: hypothetical protein B7Y94_05545, partial [Candidatus Saccharibacteria bacterium 32-49-12] diamond 246 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12
29971932 29971932 PRJNA1035005_P_NODE_20871_length_297_cov_1.044643_g20465_i0 PRJNA1035005 20871 297 1.044643 3.10258971 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 43.1 0.047   NR MFI5365794.1 2838779 g20465 i0 42.1 0.383838383838384 38 22 38.4 0 180 293 25 62 MFI5365794.1 YcbK family protein [Candidatus Binatia bacterium] diamond 114 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30288326 30288326 PRJNA1035005_P_NODE_952_length_1409_cov_3.119012_g740_i0 PRJNA1035005 952 1409 3.119012 43.94687908 Minisyncoccota bacterium 2053589 Bacteria Bacteria 274 3.74e-82   NR MEZ0209285.1 2053589 g740 i0 38.9 0.936834634492548 440 255 92 8 1300 5 43 476 MEZ0209285.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1320 274 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31046504 31046504 PRJNA1035005_P_NODE_22875_length_292_cov_1.155251_g22469_i0 PRJNA1035005 22875 292 1.155251 3.37333292 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 113 1.39e-28   NR RTL03658.1 2030827 g22469 i0 59.8 0.996575342465753 97 29 99.7 1 2 292 101 187 RTL03658.1 MAG: hypothetical protein EKK58_12485 [Candidatus Dependentiae bacterium] diamond 291 113 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
31077977 31077977 PRJNA1035005_P_NODE_39095_length_271_cov_1.080808_g38689_i0 PRJNA1035005 39095 271 1.080808 2.92898968 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 85.5 2.15e-17   NR NBP59149.1 2802965 g38689 i0 50.6 2.81180811808118 81 37 89.7 1 265 23 261 338 NBP59149.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 762 85.5 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
31109280 31109280 PRJNA1035005_P_NODE_8115_length_389_cov_1.658228_g7713_i0 PRJNA1035005 8115 389 1.658228 6.45050692 Minisyncoccota bacterium 2053589 Bacteria Bacteria 82.4 1.24e-16   NR MDR3548969.1 2053589 g7713 i0 45.7 0.709511568123393 92 48 71 1 389 114 43 132 MDR3548969.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 276 82.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31235698 31235698 PRJNA1035005_P_NODE_68015_length_248_cov_0.891429_g67609_i0 PRJNA1035005 68015 248 0.891429 2.21074392 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57.4 2.69e-7   NR MEZ0209285.1 2053589 g67609 i0 40.3 1.88709677419355 77 44 93.1 1 235 5 78 152 MEZ0209285.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 468 57.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31646840 31646840 PRJNA1035005_P_NODE_32097_length_280_cov_1.149758_g31691_i0 PRJNA1035005 32097 280 1.149758 3.2193224 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 73.6 1.15e-13   NR MBM3209833.1 2026720 g31691 i0 41.8 0.975 91 53 97.5 0 280 8 87 177 MBM3209833.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 273 73.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31955231 31955231 PRJNA1035005_P_NODE_28617_length_284_cov_1.786730_g28211_i0 PRJNA1035005 28617 284 1.78673 5.0743132 Bacteria candidate phyla 1783234 Bacteria Bacteria 91.7 4.19e-22   NR MCD6142244.1 2306012 g28211 i0 70.2 5.94718309859155 57 17 60.2 0 172 2 4 60 MCD6142244.1 cold-shock protein [Candidatus Bipolaricaulota bacterium] diamond 1689 92 0.996739130434783 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31986852 31986852 PRJNA1035005_P_NODE_38198_length_272_cov_1.291457_g37792_i0 PRJNA1035005 38198 272 1.291457 3.51276304 Candidatus Saccharimonas 1331051 Bacteria Bacteria 168 1.48e-46   NR MBP6038079.1 1917697 g37792 i0 95.6 6.9375 90 4 99.3 0 271 2 274 363 MBP6038079.1 DNA translocase FtsK 4TM domain-containing protein [Candidatus Saccharimonas sp.] diamond 1887 169 0.994082840236686 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32058240 32058240 PRJNA1035005_P_NODE_88238_length_233_cov_3.650000_g87832_i0 PRJNA1035005 88238 233 3.65 8.5045 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 144 8.25e-38   NR MDB5162891.1 2026720 g87832 i0 89.5 2.93562231759657 76 8 97.9 0 233 6 91 166 MDB5162891.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 684 144 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32311711 32311711 PRJNA1035005_P_NODE_42819_length_266_cov_1.310881_g42413_i0 PRJNA1035005 42819 266 1.310881 3.48694346 candidate division BRC1 bacterium HGW-BRC1-1 2013722 Bacteria Bacteria 67 1.32e-10   NR PKO14817.1 2013722 g42413 i0 76.3 0.857142857142857 38 9 42.9 0 150 263 1 38 PKO14817.1 MAG: hypothetical protein CVU37_14060 [candidate division BRC1 bacterium HGW-BRC1-1] diamond 228 67 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         candidate division BRC1 bacterium HGW-BRC1-1
32501488 32501488 PRJNA1035005_P_NODE_5279_length_462_cov_1.519280_g4879_i0 PRJNA1035005 5279 462 1.51928 7.0190736 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 129 2.03e-32   NR HVI08880.1 2838779 g4879 i0 52.9 0.993506493506494 153 53 98.7 6 458 3 106 240 HVI08880.1 hypothetical protein [Candidatus Binatia bacterium] diamond 459 129 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32658689 32658689 PRJNA1035005_P_NODE_73480_length_246_cov_0.901734_g73074_i0 PRJNA1035005 73480 246 0.901734 2.21826564 candidate division SR1 bacterium 2044938 Bacteria Bacteria 133 8.449999999999999e-38   NR MBB1557457.1 2044938 g73074 i0 84 2.96341463414634 81 13 98.8 0 245 3 22 102 MBB1557457.1 transcription elongation factor GreA [candidate division SR1 bacterium] diamond 729 133 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;