RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA1032461" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1032461 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
167112 167112 PRJNA1032461_S_NODE_8921_length_204_cov_1.832258_g8823_i0 PRJNA1032461 8921 204 1.832258 3.73780632 Metazoa 33208 Platyhelminthes Platyhelminthes 99.8 8.49e-26   NR CAX78411.1 6182 g8823 i0 84.5 4.32352941176471 58 9 85.3 0 176 3 7 64 CAX78411.1 40S ribosomal protein S28 [Schistosoma japonicum] diamond 882 99.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
5269969 5269969 PRJNA1032461_S_NODE_5745_length_243_cov_1.757732_g5647_i0 PRJNA1032461 5745 243 1.757732 4.27128876 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 155 4.2399999999999996e-42   NR ABY83101.1 6161 g5647 i0 100 0.987654320987654 80 0 98.8 0 242 3 306 385 ABY83101.1 heat shock protein 70 [Dugesia japonica] diamond 240 155 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
27319725 27319725 PRJNA1032461_S_NODE_503_length_628_cov_1.951641_g415_i0 PRJNA1032461 503 628 1.951641 12.25630548 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 70.5 3.83e-11   NR AAX25032.2 6182 g415 i0 39.3 0.582802547770701 122 54 55.9 3 353 3 2 108 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 366 70.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
28014478 28014478 PRJNA1032461_S_NODE_10385_length_192_cov_1.055944_g10287_i0 PRJNA1032461 10385 192 1.055944 2.02741248 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 115 1.02e-31   NR AWM96393.1 6161 g10287 i0 85.7 0.984375 63 9 98.4 0 190 2 36 98 AWM96393.1 HSP10 [Dugesia japonica] diamond 189 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
28677476 28677476 PRJNA1032461_S_NODE_15127_length_168_cov_0.882353_g15029_i0 PRJNA1032461 15127 168 0.882353 1.48235304 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 85.5 5.18e-19   NR AFJ24764.1 79327 g15029 i0 84.6 0.928571428571429 52 7 92.9 1 5 160 61 111 AFJ24764.1 Y box protein-1, partial [Schmidtea mediterranea] diamond 156 85.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
28803406 28803406 PRJNA1032461_S_NODE_9108_length_203_cov_0.753247_g9010_i0 PRJNA1032461 9108 203 0.753247 1.52909141 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 113 2.8199999999999997e-30   NR AAX28478.2 6182 g9010 i0 88.5 1.87684729064039 61 7 90.1 0 3 185 76 136 AAX28478.2 SJCHGC03032 protein, partial [Schistosoma japonicum] diamond 381 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29340523 29340523 PRJNA1032461_S_NODE_12649_length_176_cov_2.456693_g12551_i0 PRJNA1032461 12649 176 2.456693 4.32377968 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 45.1 3.24e-4   NR AAM80477.1 6182 g12551 i0 75 0.545454545454545 32 6 51.1 1 3 92 48 79 AAM80477.1 Hm1 protein [Schistosoma japonicum] diamond 96 45.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29584718 29584718 PRJNA1032461_S_NODE_6530_length_231_cov_1.708791_g6432_i0 PRJNA1032461 6530 231 1.708791 3.94730721 Metazoa 33208 Platyhelminthes Platyhelminthes 138 1.32e-39   NR THD27126.1 6192 g6432 i0 85.7 13 77 11 100 0 1 231 74 150 THD27126.1 Large subunit ribosomal protein 31 [Fasciola hepatica] diamond 3003 138 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
30572032 30572032 PRJNA1032461_S_NODE_12593_length_177_cov_1.140625_g12495_i0 PRJNA1032461 12593 177 1.140625 2.01890625 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 87.4 1e-19   NR AAX25032.2 6182 g12495 i0 87 0.779661016949153 46 6 78 0 138 1 86 131 AAX25032.2 SJCHGC04714 protein, partial [Schistosoma japonicum] diamond 138 87.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32058191 32058191 PRJNA1032461_S_NODE_10138_length_194_cov_0.889655_g10040_i0 PRJNA1032461 10138 194 0.889655 1.7259307 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 90.5 2.77e-21   NR AAX30334.2 6182 g10040 i0 93.3 2.08762886597938 45 3 69.6 0 194 60 44 88 AAX30334.2 SJCHGC03026 protein, partial [Schistosoma japonicum] diamond 405 90.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32216524 32216524 PRJNA1032461_S_NODE_17978_length_165_cov_1.198276_g17880_i0 PRJNA1032461 17978 165 1.198276 1.9771554 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 60.8 3.67e-9   NR CAA68079.1 6161 g17880 i0 60.9 0.836363636363636 46 18 83.6 0 138 1 8 53 CAA68079.1 Y-box protein [Dugesia japonica] diamond 138 60.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
32248406 32248406 PRJNA1032461_S_NODE_1378_length_438_cov_1.478149_g1280_i0 PRJNA1032461 1378 438 1.478149 6.47429262 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 47.4 3.83e-4   NR ABA40899.1 6182 g1280 i0 56.4 0.267123287671233 39 15 25.3 1 263 153 4 42 ABA40899.1 SJCHGC09658 protein, partial [Schistosoma japonicum] diamond 117 47.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
32311682 32311682 PRJNA1032461_S_NODE_7059_length_224_cov_1.571429_g6961_i0 PRJNA1032461 7059 224 1.571429 3.52000096 Fasciolopsis buskii 27845 Platyhelminthes Platyhelminthes 100 1.06e-23   NR KAA0200674.1 27845 g6961 i0 65.3 9.64285714285714 72 25 96.4 0 2 217 100 171 KAA0200674.1 Ribosomal protein l4 [Fasciolopsis buskii] diamond 2160 100 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;