RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1031674" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1031674 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28519595 28519595 PRJNA1031674_P_NODE_9887_length_298_cov_1.368889_g9676_i0 PRJNA1031674 9887 298 1.368889 4.07928922 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 87 1.86e-17   NR USN96678.1 2052152 g9676 i0 93.8 0.966442953020134 48 3 48.3 0 146 3 1 48 USN96678.1 MAG: MFS transporter [Candidatus Nomurabacteria bacterium] diamond 288 87 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
28961742 28961742 PRJNA1031674_P_NODE_4208_length_400_cov_1.837920_g3998_i0 PRJNA1031674 4208 400 1.83792 7.35168 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 85.1 3.26e-16   NR USN96574.1 2052152 g3998 i0 36.8 1.9125 125 78 93.8 1 389 15 779 902 USN96574.1 MAG: M23 family metallopeptidase [Candidatus Nomurabacteria bacterium] diamond 765 85.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
32533076 32533076 PRJNA1031674_P_NODE_3999_length_407_cov_1.571856_g3789_i0 PRJNA1031674 3999 407 1.571856 6.39745392 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 171 1.8e-49   NR USN97016.1 2052152 g3789 i0 87.4 2.74938574938575 95 12 70 0 3 287 234 328 USN97016.1 MAG: carbohydrate kinase family protein [Candidatus Nomurabacteria bacterium] diamond 1119 171 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;